Dietzia sp. oral taxon 368: C3V38_01900
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Entry
C3V38_01900 CDS
T05390
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dit
Dietzia sp. oral taxon 368
Pathway
dit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C3V38_01900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dit03021
]
C3V38_01900
03400 DNA repair and recombination proteins [BR:
dit03400
]
C3V38_01900
Enzymes [BR:
dit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C3V38_01900
Transcription machinery [BR:
dit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C3V38_01900
DNA repair and recombination proteins [BR:
dit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C3V38_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AVM63349
LinkDB
All DBs
Position
complement(392424..395930)
Genome browser
AA seq
1168 aa
AA seq
DB search
MLEGPILAVSRQTTSVSTVPGAPRRVSFAKLSEPLPVPGLLDLQTESFEWFIGSEEWQQR
AASRGTTNLEGGLESILKEISPIEDFSGSMSLSFSEPYFEEVKASLEDCREKDRTYEAPL
FVTAEFENTETGEIKSQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDRSRDK
STEKDVHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQSVTVLLKALGWTTTEIKERYG
FSEIMMSTLEKDTVEDTDQALLEIYRKLRPGEPPTRESAEALLENLFFKEKRYDLARVGR
YKVNRKLGLPDPEGDATTTLTREDIAATIEYLVRLHAGESSMQVAGGREVPVEVDDIDHF
GNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDSEAITPQSLINIRPITAALKEFFGT
SQMSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHASHYGRMCPIETPEGPN
IGLIGSLSVYARVNPFGFIETPYRRVVEGVVTDQVDYLTADEEDRYVVAQANSEIDTEGR
FVEERILVRKKHGDVEVVEAGDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQR
QSVPLVRSEAPLVGTGMELRAAVDAGDVVVNTHPGIVEEVSADFITVMDDDGGRQTYRLS
KFARSNQGTCSNQKPIVDEGDRVEVGQVLADGPCTENGEMALGKNLLVAIMPWEGHNYED
AIILSQRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDDRGIVRIG
AEVRDGDVLVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGVRVF
SRDDDDDLPPGVNELVRVYVAQKRKIQDGDKLAGRHGNKGVIGKILPAEDMPFMPDGTPV
DIILNTHGVPRRMNIGQIMETHLGWLAKAGWEVPREADGSLPDWATKLPEEIHHVEAGTN
TATPVFDGAADTEITGLLGCTLPNRDGERMVKADGKATLFDGRSGEPFPYPVAVGYMYIL
KLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTI
KSDDVVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGQAVSLGEGD
DDDLDRTAANLGINLSRDESSAADELAQ
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacccatcttggcagtctcccgccagaccacgtcagtctccaccgttccc
ggtgcgccccggagagtctcgttcgcgaagctctccgagccgttgccggtcccggggctg
ctcgacctccagacggagtcgttcgagtggttcatcggttcggaggagtggcagcagagg
gccgcctcgcgcggtaccacgaacctcgagggaggtctggagtccatcctcaaggagatc
tccccgatcgaggacttctccggctccatgtccctctcgttctcggagccgtacttcgaa
gaggtgaaggcgtccctcgaggactgccgcgagaaggaccgcacgtacgaggcgcccctg
ttcgtcaccgcggagttcgagaacaccgagaccggtgagatcaagtcgcagaccgtcttc
atgggcgatttccccatgatgaccgacaagggcacgttcatcatcaacggcaccgagcgg
gtcgtcgtgtcccagctcgtccggtcgccgggcgtgtacttcgaccgttcacgcgacaag
tccacggagaaggacgtccactccgtcaaggtcatcccgtcgcgcggcgcgtggctcgag
ttcgacgtcgacaagcgcgacaccgtgggcgtgcgcatcgaccgcaagcgtcgccagtcg
gtcaccgtgctgctcaaggcgctgggctggaccaccaccgagatcaaggagcgctacggc
ttctccgagatcatgatgtccacgctggagaaggacacggtcgaggacaccgaccaggcc
ctgctggagatctaccgcaagctgcgcccgggcgagccgccgacccgcgagtccgccgag
gccctcctggagaacctcttcttcaaggagaagcgctacgacctggcccgcgtcggtcgc
tacaaggtcaaccgcaagctcggcctgccggatccggagggcgacgccaccaccacgctc
acgcgcgaggacatcgccgcgaccatcgagtacctcgtgcgcctccacgcgggcgagtcg
agcatgcaggtcgccggcggccgcgaggtgccggtcgaggtcgacgacatcgaccacttc
ggcaaccgtcgtctgcgcaccgtcggcgagctcatccagaaccaggtccgcgtcggcctg
tcccgcatggagcgcgtcgtccgcgaacgcatgacaacgcaggactccgaggcgatcacc
ccgcagtcgctgatcaacatccggcccatcaccgcggcgctcaaggagttcttcggaacc
tcccagatgtcgcagttcatggaccagaacaacccgctgtcgggcctgacgcacaagcgt
cgcctctcggcgctcggtcccggcggcctctcgcgtgagcgcgccggcctcgaggtccgc
gacgtccacgcctcgcactacggccgcatgtgcccgatcgagacccccgagggtcccaac
atcggtctcatcggttcactctcggtgtacgcccgcgtcaacccgttcgggttcatcgag
accccgtaccgccgtgtcgtcgaaggcgtcgtcaccgaccaggtggactacctgacggct
gacgaggaggaccgctacgtcgtcgcgcaggccaactcggagatcgacaccgagggtcgc
ttcgtcgaggaacgcatcctcgtccgcaagaagcacggcgacgtcgaggtcgtcgaggcc
ggtgacgtcgactacatggacgtctcgccgcggcagatggtctccgtcgccaccgcgatg
atcccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgcagcgt
cagtccgtgccgctcgtacgttccgaggcgccgctcgtcggcaccggcatggagctgcgt
gcggccgtcgacgccggcgacgtcgtcgtgaacacccacccgggcatcgtggaggaggtc
tcggccgacttcatcaccgtcatggacgacgacggcggtcgtcagacgtaccgcctgtcc
aagttcgcgcgctccaaccagggcacctgctccaaccagaagccgatcgtcgacgagggc
gaccgcgtcgaggtcggccaggtcctcgccgacggcccctgcaccgagaacggcgagatg
gcgctcggcaagaacctgctcgtggcgatcatgccgtgggagggtcacaactacgaggac
gcgatcatcctctcgcagcgcctcgtggaggaggacgtgctcacgtccatccacatcgag
gagcacgagatcgacgcccgcgacaccaagctgggcgccgaggagatcacccgcgacatc
cccaacgtctccgacgaggtcctcgccgacctcgacgaccgcggcatcgtgcgcatcggc
gccgaggtccgcgacggcgacgtgctggtcggcaaggtcaccccgaagggcgagaccgag
ctgaccccggaggagcgcctgttgcgcgcgatcttcggagagaaggcgcgcgaggtgcgc
gacacctcgctcaaggtgccccacggtgagtccggcaaggtcatcggtgtgcgcgtgttc
tcgcgcgacgacgacgacgatctgccgcccggcgtcaacgagctggtgcgcgtgtacgtg
gcgcagaagcgcaagatccaggacggcgacaagctcgccggccggcacggcaacaagggc
gtcatcggcaagatcctccccgccgaggacatgccgttcatgcccgacggcacgccggtc
gacatcatcctcaacacgcacggcgtcccgcgtcgtatgaacatcggtcagatcatggag
acccacctcggctggctggccaaggcgggctgggaggtgccgcgcgaggcggacggctcc
ctgcccgactgggcgaccaagctgccggaggagatccaccacgtcgaggccggcaccaac
accgcgacccccgtcttcgacggcgcggccgacaccgagatcaccggtctgctcggctgc
accctgccgaaccgtgacggtgagcggatggtcaaggccgacggcaaggcgacgctgttc
gacggccgctccggcgagccgttcccgtacccggtggccgtgggttacatgtacatcctc
aagctgcaccacctggtggacgacaagatccacgcccgctcgaccggtccgtactcgatg
atcacccagcagccgctcggcggtaaggcccagttcggcggccagcgcttcggtgagatg
gagtgctgggcgatgcaggcctacggcgcggcgtacacgctgcaggagctgctcaccatc
aagtccgacgacgtcgtgggccgcgtgaaggtctacgaggcgatcgtcaagggcgagaac
atccccgagccgggcatcccggagtccttcaaggtcctcctcaaggagctgcagtcgctg
tgcctcaacgtcgaggtgctctccagcgacggccaggcggtctccctgggcgagggtgac
gacgacgacctcgaccgtaccgccgcgaacctcgggatcaacctctcgcgcgacgagtcc
tcggcggccgacgagctggcccagtag
DBGET
integrated database retrieval system
