Dickeya lacustris: O1Q98_06590
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Entry
O1Q98_06590 CDS
T08984
Name
(GenBank) polysaccharide lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dlc
Dickeya lacustris
Pathway
dlc00040
Pentose and glucuronate interconversions
dlc01100
Metabolic pathways
dlc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
O1Q98_06590
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O1Q98_06590
Enzymes [BR:
dlc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
O1Q98_06590
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Motif
Pfam:
Pectate_lyase_4
TraQ_transposon
Motif
Other DBs
NCBI-ProteinID:
WFN56910
UniProt:
A0ABY8GAE5
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Position
1481593..1482750
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AA seq
385 aa
AA seq
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MKNTRVHSIGTKSLLAAVVTAALMASTAYAAGEKDAATTGWATQNGGTTGGAKAATIVPV
KTIADFKKALNGTDASPKIIKITGPIDISGGQAYKDSADQKARSQISIPSNTTIIGDGSN
GKFTNGSLVIKGVSNVILRNLYIETPVDIAPKYETGDGWNAEWDAAVIDSSTNVWVDHVT
ISDGSFTDDKYTTKNGEKYVQHDGALDIKKGSDYVTVSNSRFELHDKTILIGHSDTNGSQ
DSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNNVYLGDVKHSVYPYLYSFGLGTSGSIL
SESNSFTLSNLKSIDGQNPECSIVKAFNSKVFSDKGSLVNGSTTTKLDTCGLTAYKPTLP
YKYSAQTMTSSLANSIVSSAGYGKL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacgcgtgtacattctatcggaaccaaaagtttactggccgctgtcgtcaca
gcagcgctgatggcctccaccgcttatgcggcaggagaaaaagatgcggcaacgactggc
tgggcgacgcaaaacggtggtactaccgggggcgcgaaagcggcaaccatcgttccagta
aaaactatcgctgactttaaaaaagcgctgaatggcactgatgcatcacccaaaatcatc
aaaatcaccgggccgattgatatcagcggcggtcaggcttataaagactcagccgaccag
aaagcacgtagccagatcagcattccgtccaacaccaccatcatcggtgatggcagtaac
ggtaaattcaccaacggttctctggttatcaaaggtgtgagcaacgttattctgcgcaac
ctgtatattgaaacaccggttgacatcgcaccgaaatatgaaaccggtgacggctggaac
gctgagtgggatgcagcagttatcgacagctccactaacgtttgggttgaccatgtaacc
atcagtgatggtagcttcactgatgacaaatacaccacaaaaaatggcgaaaaatacgtt
cagcatgacggcgcgctggatatcaaaaaaggctctgactatgtcaccgtctctaacagc
cgctttgaactgcatgacaaaactatcctgatcggccacagcgacactaacggttcacaa
gactccggcaaactgcgcgtgaccttccacaacaacgtgtttgatcgtgtaactgaacgt
accccacgcgtacgctttggtagcatccatgcttataacaacgtctatctgggtgatgta
aaacacagcgtctatccgtacctgtacagcttcggtctgggcaccagcggcagcattctg
tctgaatctaactcatttactctctctaacctgaagagcattgacggtcagaaccctgag
tgcagcatcgtgaaagccttcaacagcaaggtattctccgataaaggctctctggtgaat
ggttccacaaccaccaaactggatacctgtggcctgaccgcttacaaaccgactctgccg
tacaaatatagcgctcaaacgatgactagcagcctggctaacagcatcgtcagcagcgcg
ggttacggcaaactgtaa
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