Diospyros lotus (date-plum): 127786639
Help
Entry
127786639 CDS
T10632
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03018
RNA degradation
dlt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127786639
09123 Folding, sorting and degradation
03018 RNA degradation
127786639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127786639
03041 Spliceosome [BR:
dlt03041
]
127786639
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127786639
mRNA degradation factors
5'-3' decay
Lsm complex
127786639
Spliceosome [BR:
dlt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127786639
Complex C
U2 snRNP components
127786639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
DUF1256
LSM14
Motif
Other DBs
NCBI-GeneID:
127786639
NCBI-ProteinID:
XP_052170127
LinkDB
All DBs
Position
12:complement(4786865..4789530)
Genome browser
AA seq
93 aa
AA seq
DB search
MLFFSYFKDMVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPADGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttctcgtatttcaaggacatggtgggcagggaagtgacagtggagctgaag
aacgatctggccatccggggaactctgcattcggttgatcagtacctcaacattaagctt
gagaacactagggttgttgatcaagacaagtacccccacatgctctctgtgagaaactgc
tttatcagaggatcagtggtgagatatgttcagttgcctgcagatggagttgacatcgaa
ttacttcatgatgccacaagaagagaagctcgcgggggctga
DBGET
integrated database retrieval system