Diospyros lotus (date-plum): 127788689
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Entry
127788689 CDS
T10632
Name
(RefSeq) transcription factor bHLH140 isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt03410
Base excision repair
Brite
Enzymes [BR:
dlt01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
127788689
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
127788689
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
127788689
DNA repair and recombination proteins [BR:
dlt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
127788689
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
127788689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
127788689
NCBI-ProteinID:
XP_052173220
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Position
13:complement(17893602..17923439)
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AA seq
758 aa
AA seq
DB search
MEVDAESSIKCEKDEQSKAIMVILVGAPGSGKSTFCDLVMEASTRPWVRICQDSIGAGKA
GTKTQCLTAAAAALKDGKSVFIDRCNLDMEQRANFMKLGSPQVDMHALVLDLPAKLCISR
SVKRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGFSRITFCQNENDVQGAISIYSALGP
MDSLPSGCFGQKNPDTKIQLGIMKFLKKVNTPVNTASRENSSKDSVTTDFVKDNDSGFKG
PEDASGTAGKVKEHEDLAVGSVNCDSSFGNIPTLAFPSISTADFQFDLEKASDIIVEKVE
EFVTKLGNARLVLVDLSRESKILALVRAKARWKNINSDKFLTFVGNITRLYSEGGLRCNV
IANAANWRLKPGGGGVNAAVYSAAGPDLDVATKERARSLSPGKALVVPLPSTSPLFIREG
VTHVIHVLGPNMNPQRPNFLNNDYMKGCKILREAYTSVFDGFASIISFQEPQHKDTTERH
GSALSESPLDCQISCMNQYSNADQKVKREGIYESERNKKCKGLQEECGSEATGATDIKEN
TSSGKKNESKPAAWGSWAQALYRIAMQPEKHKDTVLEISDDIVLLNDLYPKAKKHLLVLA
RCNGLDQLADVRKEHLELLRTMHAVGLKWAEKYLSEDKTLVFRLGYHSCPSMRQLHLHVI
SQDFNSEYLRNKKHWNSFNSPFFRDSVDVMEEIDKHGQVTLEDDRLLTMELRCHRCRSAH
PNIPRLKSHIAQCQAPFPAPLLQNGRLVLVLEKDGTAQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgacgccgaatcctcgatcaagtgtgaaaaggacgagcagagcaaggcaatt
atggtgatactggtgggtgcgcccggtagcggcaagtccaccttctgcgacctcgtcatg
gaagcctctacccgcccctgggttcgtatctgccaggacagtattggtgccggtaaagcg
ggaacaaaaactcagtgtcttacagctgcagctgctgcattgaaagatggaaaaagtgta
tttatcgacagatgcaatcttgatatggaacaacgtgctaactttatgaagcttggtagc
ccacaagtagatatgcatgctctggtgcttgatcttcctgcaaagctttgcatatcccgt
tctgtaaagaggactgggcatgaaggaaatttacaaggtggaaaagctgcagctgttgtg
aatagaatgttgcaaaagaaggaattacctaaactcagtgaaggattttcgaggatcact
ttttgccagaatgaaaatgatgttcaaggggctattagcatctatagtgctcttggccca
atggattcccttccaagtggctgctttggccagaaaaaccctgataccaaaattcagctt
ggtataatgaagttcctcaaaaaagtgaatacccctgttaatactgcatccagagaaaat
agctcaaaagattctgtgaccactgattttgtcaaagacaatgattctggatttaaaggg
ccagaagatgctagtggaactgctggtaaggtaaaggaacatgaagatctggctgtgggt
tctgttaattgcgattcttcttttggcaatattccaactttggcatttccatctatttca
actgctgatttccagtttgatcttgaaaaggcatctgatattattgttgagaaagttgag
gagtttgtgactaagcttggaaatgctaggcttgttcttgttgacttatctcgtgaatcc
aagatcttggctttggttagggctaaggctagatggaagaatattaactctgataagttc
ctgacgtttgtgggaaatataactcgactatattctgaaggaggtttacgctgcaatgtg
atagctaatgctgctaattggcggttaaaacctggaggtggaggtgtcaatgctgctgta
tatagtgctgcaggtccagacctggatgtggcaaccaaggaacgtgctaggtctctttcc
cctggaaaagctttggttgtacctcttccttcaacttctcccttgtttattagggaaggg
gttacccatgtcatacatgttcttggtccaaatatgaacccacaaaggccaaactttctc
aacaatgactatatgaagggttgcaaaattcttcgtgaggcttacacttcagtttttgat
ggttttgcatctataattagtttccaagaaccacagcataaggatacgactgaaagacat
ggatctgcactgtcagagtccccacttgactgtcagataagttgtatgaatcaatattca
aatgctgatcagaaggtcaagagagagggtatctatgaatccgagagaaacaaaaagtgc
aaaggccttcaagaagaatgtgggagtgaagcaactggtgctacagacataaaggagaat
acaagtagtggaaagaaaaatgaaagcaagcctgcggcctgggggtcgtgggctcaagct
ctttatcgtattgccatgcagcctgagaagcataaagatactgtgttagagatctcagat
gacattgttttgctgaatgatctttatccaaaagcaaaaaagcaccttttagttttggca
cgttgcaatggtcttgaccaacttgctgatgtccgtaaagaacaccttgagctattaagg
acaatgcatgctgtgggcttgaagtgggctgagaaatatctaagtgaagacaaaacatta
gttttccgccttgggtaccattcgtgcccatcaatgcggcaattgcaccttcatgtaatt
agtcaggacttcaattctgaatatctgaggaataagaagcactggaattcattcaattct
cctttcttccgtgactcggtggatgtgatggaggaaatcgataagcatggacaagtcacc
ttggaagatgataggctcttgacgatggagttgcgctgccaccggtgtcgaagtgcacac
cccaacataccccgccttaaatctcatatagcccagtgtcaagccccctttcccgcacct
ctgctccaaaatggtcgtctagtgcttgtcctggagaaagatggcaccgctcaatag
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