Diospyros lotus (date-plum): 127804736 Help Entry 127804736         CDS       T10632                                  Name (RefSeq) protein CLP1 homolog isoform X1   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism dlt  Diospyros lotus (date-plum) Pathway dlt03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:dlt00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     127804736  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dlt03019]     127804736 Enzymes [BR:dlt01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      127804736 Messenger RNA biogenesis [BR:dlt03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      127804736 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N nSTAND3 CbiA AAA_22 SRPRB ABC_tran FtsK_SpoIIIE ATP_bind_1 AAA_29 DUF1611 MMR_HSR1 Motif Other DBs NCBI-GeneID:  127804736 NCBI-ProteinID:  XP_052197660 LinkDB All DBs Position 6:3081016..3086350 Genome browser AA seq 439 aa AA seqDB search MSFGGATMGPPATAAGSSMTRQVKLEKECELRIEVGPDAPLRLRLVTGTAEIFGTEIAPE IWLTFPPRLKFAVFTWYGATFEMDGTTETDYTADETPMISYVNVHAVLDGRRNRAKASPS DSDVSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATP IEMPIDPVEGIPLEMPLVYFYGHTSPGVNAELYKVVAKELAQTLERQFAGNAESRAAGMV INTMGWIEGVGYELLLHAIDTFNANVVLVLGQEKLCSMLKDVLKSKHNVDVVKLQKSGGV VSRNAKVRQKARSYRIREYFYGLANDLSPHSNIANFSDLSVYRIGGGPQAPRSALPIGAE PAADPTRLVPVNISQDLLHLVLAVSFAKEADQIISSNVAGFIYITDIDIQRKKITYLAPS VGDLPSRFLIVGTVTWIET NT seq 1320 nt NT seq  +upstreamnt  +downstreamnt atgtcgttcggaggagcaaccatggggccaccggcaacggcggctggttcgtcgatgacg aggcaggtgaagctagagaaagagtgcgagctgagaatcgaagttggtccggatgcacct ctccgccttcgcctggttaccggcaccgccgagatctttggcaccgaaatcgctcctgaa atctggctcacctttcctcccaggctcaaattcgctgtttttacttggtatggagccaca tttgagatggatggcactacagaaactgattatacagcagatgaaacacctatgattagc tatgtaaatgttcatgctgtactggatgggcgtagaaatcgtgctaaagcatcacctagt gactctgatgtttctcagggtcccagggtaattgttgtgggacctacagattcaggaaag agtaccttgtcaaggatgcttcttagttgggcagctaaacaaggatggaaacctactttt gtggatttggatattggccaaggatctataaccattcctggatgtattgctgctacccca attgaaatgccaattgatccagtggaaggaatccctcttgaaatgcctcttgtttatttc tatggacacacgagtcctggtgttaatgcagagttatacaaagtggttgcaaaggagctg gctcagactctggagagacagtttgctggaaatgcagaatctcgagctgctggcatggta ataaataccatgggatggatagagggtgttggctatgagttgcttcttcatgcaattgat acattcaatgcaaatgttgttttggttctgggtcaggagaagctttgcagcatgctaaaa gatgttttgaagagtaagcataatgttgatgttgtgaaactccaaaaatctggtggtgtt gtatctaggaatgcaaaggtccgtcagaaggccaggagttacaggataagggaatatttt tatggccttgcaaacgatctttcccctcattccaatattgcaaatttcagtgacttgtct gtctatagaattggtggtggacctcaagccccacgttcagccctgccaattggtgcagag cctgctgcagatcctacaagattggttcctgtgaatatcagccaggacttgctccattta gttcttgccgtttcattcgccaaggaggctgatcaaattatttcaagtaatgttgctggt ttcatctatatcacagacatagatattcagaggaagaagattacataccttgctccatca gttggggatctcccaagcagatttttgatcgtgggaactgtgacatggattgaaacctga

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