Diospyros lotus (date-plum): 127806966
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Entry
127806966 CDS
T10632
Name
(RefSeq) uncharacterized protein LOC127806966 isoform X1
KO
K18734
protein SMG8
Organism
dlt Diospyros lotus (date-plum)
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlt03019
]
127806966
Messenger RNA biogenesis [BR:
dlt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
127806966
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
127806966
NCBI-ProteinID:
XP_052200571
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Position
1:27437129..27468879
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AA seq
1224 aa
AA seq
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MDSPNQPSMRVLIRPPNPKAAQAQSTSPLPPRPDHSTQPPAPPQDGVVVVGFIARRHGDV
TQLINRVIDANVFGSGNFDKVFSIDKADNGEEVKNFFKYRRISYYHEEEKGILYLQFSLT
GCPAMEGFSEPSSSSFESELEERDFGDLQGMLFMFSVCHVIIFIQEGSCLDTQILKKFRI
LQAAKHAMAPFVKSQATQPLAYRPHSSSSSRTSVLGTSSTNHSPGRSGSIRNASAISFMS
GIGSYTSLFPGQCAPVILFVFLDDFSDITHGSSAEELVDMSSLNPYSSLGSSARLNLPMK
GSGPVVVLARPVNKSEGGLWKKLQSSLEAQIRFLIKKCRTLTGSEGSHTGSRSAGISNAA
PLFSLDASKAVALLGRSSNQRGESLDFATCLVEDVLNGKATSDALLLENYCQSSNKEDIV
TVKEFICRQADILRGKGGLVANTSSGSAAGVGMVAVAAAAAAAASVASGKTFSTPELPHM
DNWLSSSQLILKGILSAKRGFIVEPESIKRKMRQKSSVAPPVEGNVQRVTDPLDIAVSTL
ESGKGLNLKFSTLWCERALPAAKEVYLNELPPCYPTSKHEAHLEKALRAFHSMVKGPAVQ
LFMRKLEDECTSIWKSGRQLCDAVSLTGKPCMHQRHDVETAGLVSGDMIKPHSSGFFFLQ
ACSCGRSRQLRSDPFDFETANATSICSADCDKLLPAFQLPQVKNTGPIEPSSWSLVRVGS
ARYYEPAKGLLQSGFCAAQRFLLKCTIFLEKPKYQKGSFASAGQQGSVIRLSTEPLDASL
GCADVKKSDTRMNMEKSQSEAETQRKLPSENSQVDDKKINFRKAVPNFAMKKPFSEVVAG
SAVAVSSFPPLQSRKQLSAGLGKGMKQVLARDWGAEQDHQTADYQRSQKSEGISAIQEHI
NENAIGANGYTNGNPFLQIGSNVVPVNMNTGEKNKLSTPLKHVILYVGVEYECPHGHRFI
LTPELLNELGSPHSSSEESYPPSAVENFDNKRADLSKVDKNGSHNKAHRDSNVMNTGTVH
KVRNLNKMKEIAANSQYLNGMVQFSSAGKEQTQSYLGVSSVNDFAKNHERSLHSIDLDDG
AFSLLNRNLPIYMNCPHCRISKNKNDSSKIKFAGTISQLRRIFLVTPPFPVTLATCPDIH
FETSCLPSSVPGREQKLEFKFGCPVILPPDSFLSLRLPFIYGVQLEDGFLQSLKPFEVQP
ELTAWIAKGTALQVISKATGPYEG
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggactcgcccaatcagccttccatgcgagtcctaatccgcccgccaaacccgaaagca
gcccaagcccaatccacttctcctcttccaccccgcccagatcactcaacccaaccgccg
gctcctccccaagacggcgtcgtcgtcgttggcttcatcgcgaggcggcacggcgacgtg
acccagctaatcaaccgcgtcatcgacgccaatgtgttcggttccggcaatttcgacaag
gttttcagcattgataaagcggataatggggaagaggtgaagaatttttttaaatacagg
agaattagttactaccatgaggaagaaaagggtatactctatttgcagttttctttaacc
ggatgtccggcaatggagggtttttccgagccctcgtcttccagttttgaatcagaactg
gaagagcgcgattttggtgatctccaagggatgcttttcatgttctctgtttgccatgtt
atcatatttattcaggaggggtcatgcctagatacccagatcttgaagaaatttcgaatt
ttacaagctgccaaacatgcaatggctccatttgtgaaatctcaagctacacaaccattg
gcatatagacctcattcttcttcatcatcaagaacatctgtgttgggaacatcttctacc
aatcactctcctggtagaagtggtagcattcgcaatgcttcggctatttcatttatgtcg
ggaataggttcatacacctctttgtttccaggacagtgtgctcctgtgatactttttgtc
tttcttgatgatttctcagatataactcatggttctagtgcagaggagttagtagacatg
tcgtcattgaacccatattcaagtttaggtagttcagctaggctaaacttgcctatgaaa
ggatcaggaccagttgttgtcctagcacgccctgtgaataaatctgaaggtggattgtgg
aagaaattgcagtcttcccttgaagcgcagatccgttttttgattaaaaaatgtaggaca
cttacaggttctgaaggtagtcatactggttcaagaagtgctgggatatcgaatgctgca
cctttattttcacttgatgcatccaaggcagttgctttgttgggtagatcttcaaatcag
agaggtgaatctcttgattttgctacttgccttgtggaggatgttttaaatggcaaggca
acctctgatgcccttttgctagaaaactattgccagagttcaaacaaagaggatattgta
actgtgaaagagtttatctgcaggcaggccgatattctaagagggaaaggggggttggtt
gctaataccagcagtggctcagctgctggtgttggtatggtggctgttgctgcggctgca
gcagctgcagcctcagttgcatctgggaagacttttagtactcctgaacttcctcatatg
gataattggttatcttctagtcaactcatactaaaaggcattctttctgcgaaacgtgga
ttcatagttgaacctgaaagcattaaaagaaaaatgcgtcaaaaaagcagtgttgcaccg
ccagttgaaggaaatgttcaaagagttacagatcccctagatattgcagtgtctactttg
gagagcggtaaaggacttaaccttaaattttctacattgtggtgtgaaagagcccttcca
gctgcaaaggaagtttatctaaatgaattgcctccttgctatccaacttcaaagcatgaa
gcccacttggagaaggctttgcgtgctttccattcaatggtcaagggacctgcagtgcaa
ctcttcatgagaaaattggaggatgagtgcacatccatttggaagtcaggaagacaactc
tgtgatgcagtcagtttgacagggaaaccatgtatgcaccagagacatgatgttgaaaca
gctgggttggtttcaggagacatgatcaagccacattcaagcggattctttttccttcaa
gcttgttcttgtggccgttcacggcaattgcgatctgatccatttgattttgaaacagct
aatgctacttccatttgttctgcagactgtgataaacttcttcctgcattccaattacca
caggtaaaaaacacaggaccaattgagccatcctcatggagtttggttcgagttggcagt
gcgaggtactatgagcctgcaaaaggcttacttcagagtggattctgtgctgctcagagg
tttctgttgaagtgtacaatttttcttgagaaacccaaataccaaaaaggttcatttgca
agtgctgggcagcaaggttcagtaattaggttaagtacagaacccctggatgcatctctt
ggatgtgcagatgtaaagaaatctgatactcgtatgaatatggaaaaatcgcagagtgaa
gctgaaactcaaagaaagcttccctcagaaaacagtcaggttgatgataaaaagatcaat
tttcgcaaagctgttcctaattttgcaatgaagaaacctttttcagaggttgttgctgga
tcagcagttgctgtttcaagcttccctcctttacagtcaaggaagcaactttcagcaggt
ttgggaaaaggcatgaagcaagttctggcaagagattggggtgcagaacaggatcatcaa
actgctgattatcaacgatctcaaaaatcagaaggcatctctgctattcaggaacacata
aatgaaaatgcaattggtgccaatggttatacaaatggcaatccgtttttacagataggt
agcaatgttgttccagtgaacatgaatactggtgaaaagaacaaattaagcactcctctg
aaacatgtaatattgtatgttggggttgagtacgagtgcccccatggccaccggttcata
ttaaccccagagcttctcaatgaacttggttctccacattcatcctctgaagaatcttat
cccccatcagctgtggaaaattttgacaataaaagggcagatctttccaaagtggataag
aatggtagccataacaaagcccacagggactcaaatgtgatgaatactggtacagttcat
aaggtgagaaatctgaacaagatgaaagagatagcagccaatagccaatacttgaatggg
atggtgcagttttctagtgcaggaaaagaacagacccagagctatctcggcgtctcatca
gttaatgattttgccaaaaatcatgaacggagccttcattctattgacctggatgacggt
gctttctccttgttgaatagaaatttaccaatttacatgaactgtccgcactgtaggatc
tccaagaataagaatgattcctctaagattaaatttgctggaacaatatcacagctccgg
aggatctttttggtcacgcctccttttccagttactttagcaacatgtccagatatacat
tttgagacatcatgcctaccttcatctgttcctggccgtgaacaaaaattggagttcaag
tttggatgtccagtgattttgccaccagatagtttcctttcccttagactcccatttatt
tatggtgtacaactggaggatggatttctgcaatctcttaaaccctttgaagtccaacct
gaactgactgcctggattgctaaaggcacagcattgcaggtaatatccaaggcaactggt
ccatatgagggataa
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