Diospyros lotus (date-plum): 127807886
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Entry
127807886 CDS
T10632
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
dlt Diospyros lotus (date-plum)
Pathway
dlt00450
Selenocompound metabolism
dlt00970
Aminoacyl-tRNA biosynthesis
dlt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dlt00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
127807886
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127807886
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dlt01007
]
127807886
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dlt03016
]
127807886
Enzymes [BR:
dlt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
127807886
Amino acid related enzymes [BR:
dlt01007
]
Aminoacyl-tRNA synthetase
Class I (U)
127807886
Transfer RNA biogenesis [BR:
dlt03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
127807886
Prokaryotic type
Other AARSs
127807886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
C1_1
CoV_peptidase
Anticodon_1
DUF3952
Motif
Other DBs
NCBI-GeneID:
127807886
NCBI-ProteinID:
XP_052202036
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All DBs
Position
8:29926898..29956643
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AA seq
812 aa
AA seq
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MADLSGSDSDRKAVKLPVEGNRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRG
YNTIYICGTDEYGTATETKAMEDNSTPQQICDKYHAIHKEVYKWFNISFDEFGRTSSPQQ
TEVCQAIFKKLLDNNWLSENTMQQLYCDTCKRFLADRLVEGTCPTPGCNYDSARGDQCEK
CGKLLNPTELQDPRCKVCQNKPRIRDTNHLFLELPLLKDKLEEYIQQMSVAGSWSQNAIQ
STYAWLKEGLKPRCITRDLKWGVPVPHEKFKDKVFYVWFDAPIGYVSITSCYTSEWEKWW
KNPENVELYQFMGKDNVPFHTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSKGI
GVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWLDLQAKLNSELLNNLGNFINRVLSF
IAKDPAAEDSKGVGYSSIIPDATGAESHPLTKKFGEKVGDYAQQYLDAMEKVKLKQGLKI
AMSISGEGNAYLQESKFWKLYKEDQTSCSVVMKTSVGLVYILACLLEPFMPSFSLEVLKQ
LNLPPDIHDSLSDGKGDIEKAKRPWEFVPAGHKIGTPEPLFKELKDEEVEFFRQKFAGSQ
ADRILKAEAEAKELANQLKKTEVSDGKGKKRPTKSLAEAKPKASVEAEISISRLDIRVGL
ITKAQKHPDADSLYVEEIDVGEGQPRTVVSGLVKYIPLEDMQNRKVCVLCNLKPATMRGI
KSQAMVLAASDSDHTKVELVEPPHSAPVGERVTFPGFKGDPDDVLNPKKKVWETLQPDFG
TNEELVACYKDLPFTTSAGVCKVSSISRGSIR
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctctccggcagcgatagtgatcggaaggccgtgaagcttccggtcgaaggc
aaccgaaacatcctcatcaccagcgccttgccttatgtcaacaacgtccctcatctcggc
aacatcatcggctgcgtcttgagtgctgatgttttcgcccggtattgccgccttcgcggc
tacaacaccatttacatatgcgggactgatgagtatggcacagccactgagaccaaggcc
atggaggataattccacgcctcagcagatatgcgacaagtaccacgcaattcataaggag
gtctataaatggtttaacataagttttgatgaatttggacgcacatcatctccacagcag
actgaagtttgccaggccattttcaagaaacttttggataacaattggctttctgagaac
acaatgcagcagttgtactgtgatacatgtaagaggttcttagctgaccgacttgtagaa
ggcacatgcccgacgccgggttgtaattatgattctgcacgtggtgatcaatgtgaaaag
tgtggaaaacttttaaatccgacagaactacaagatcccagatgcaaagtttgtcaaaac
aaacctcgcatccgtgatacaaaccacttgtttctggagttgcctttgttgaaggataaa
ctagaggagtacatacaacagatgtcagtagctgggtcttggagccagaatgctatccaa
tcaacatatgcatggctaaaagaaggactaaaacctcgatgcattacacgagatttgaag
tggggagttcctgttccacatgagaaattcaaggacaaggttttctatgtatggtttgat
gcaccgatcggatatgtctcaattacatcatgctatacatctgagtgggagaagtggtgg
aagaatcctgaaaatgtggagctctatcagtttatgggcaaggataatgtgcctttccac
actgttatgttcccatccactcttcttggaactggtgaaaagtggactatgatgaaaacg
attagtgttactgaatatttgaactacgaggcagggaagttctcaaagagcaagggcatt
ggtgtttttgggaatgatgcaaaagatacaaacattcctgtggaagtatggagatattac
ttgttaactaataggccagaggtatcagatacattatttacctggttggatttgcaagca
aaactaaacagcgaattgctgaataatttgggcaacttcatcaatcgagtcttgagcttc
attgctaaggatccagctgcggaagatagtaaaggggtaggttatagctccattattcct
gatgcaacgggagcagaatcacatcctttaacaaagaaatttggagaaaaagttggtgat
tatgcacagcagtatttggatgccatggagaaggttaaactcaagcaaggattgaagatt
gcaatgagtatttcgggtgagggaaatgcttatctgcaagagagcaaattctggaagctt
tacaaggaggaccaaacttcctgttcagtagttatgaagacttcagtagggttggtttat
atccttgcatgtctgttagaaccttttatgccatctttttccctggaggtacttaaacag
ctcaatttgccccctgatatacacgattcactttctgatggaaaaggtgatattgaaaaa
gcaaagaggccctgggaatttgtacctgccggacacaaaattggaactccagagccatta
ttcaaggaactgaaagatgaagaagtagagttctttaggcagaagtttgctggaagtcaa
gctgataggattctgaaggcagaagctgaagccaaggagcttgctaatcaattgaagaag
acagaagtttcagatggaaagggtaagaaacggccaactaaatctctggctgaagctaaa
ccaaaggccagtgttgaagcagaaatttcaattagtagacttgatatccgtgttggtctt
attacaaaagctcaaaaacatcctgatgccgactctttatatgtggaagagattgatgtt
ggtgaaggacaacctcggactgttgttagtggacttgtcaagtacattcctcttgaagac
atgcagaaccgtaaggtctgtgttctatgcaacttaaagccagcaacaatgcggggtata
aaatcacaggcaatggttcttgctgcatccgactctgatcacaccaaagttgaattggtt
gagccaccccattctgctcctgttggggagagagtgacatttcctggattcaaaggtgat
cctgatgatgttttaaaccctaagaaaaaggtctgggaaacattgcaaccagattttggc
actaacgaggaactagttgcttgctacaaggatttaccattcaccacatcagcaggcgtg
tgcaaggtttcatccatatccagggggtcaataaggtag
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