Dietzia lutea: A6035_08660
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Entry
A6035_08660 CDS
T05442
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
dlu
Dietzia lutea
Pathway
dlu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dlu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6035_08660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dlu03019
]
A6035_08660
Messenger RNA biogenesis [BR:
dlu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A6035_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AWH92226
UniProt:
A0A2S1R7F5
LinkDB
All DBs
Position
complement(1925851..1928082)
Genome browser
AA seq
743 aa
AA seq
DB search
MTESSSTGRGRGRTRRAAGRPSGEPAPATAVQFTEPTPAPDAPAAESAPSRSGRDRAQQD
KGQQDKGQRGGQQSRSEQSNGGQNKGDQDKGGQNKADQGRAQQESSKGGSRGRGRGSASG
GQEGGQKSGGQKSGGQNGGNQDSGGQNSGRGRGGRSRGRGRGETSTAEFGGVKTMQGGDM
TVRLPSPPKPRKGALRIVALGGISEIGRNMTVFEYDSKLLIVDCGVLFPSSTEPGVDLIL
PDFGHIEDRLDQVEALVLTHAHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAAKCQEHRI
KPVFRTVDESSVSDFGKFQVRYFDVNHSIPECLGVVIKAGDNTVMMSGDIKLDQLPTDKR
PTDLPKMSRFGDEGVDLLLLDSTNATTPGISPSESGVRPALQRLIADARQLVVVACFASN
VYRVQSVVDAAAATGRKVALTGRSMLRNMEIALEMGLLTDPDRVLVDMDTAAKLPSEKVL
VMTTGTQGEAMAGLSRMARREHRQINLSEGDTVLFSSSIVPGNEESVFGVQNGLSQMGVN
VVTSREANIHVSGHGYSGELLFIYNAVRPKSAMPVHGEWRHLRANKALAVATGVPEENVV
LAQNGVVVDLVDGKASVVGQVPVGNLYVDGLSTGDIGDTVLADRTALSEDGFIVATVVVD
PRTGRPVSKPQIIGKGFTDEPGALAPVVELVENALWDLAGEGETDPYRIAQAVRRTVGRW
VSEKWRRKPMIVPTVITSAVAEA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaagttcctccaccggccgcggacgcggccgtacccgacgcgccgcggggcgg
ccctcgggcgagccggcacccgccactgccgtgcagttcaccgagccgaccccggctccc
gacgcccccgccgccgagtcggcgccgtcccgctccggccgggacagggctcagcaggac
aagggccagcaggacaagggccagcgcggcggccagcagagcaggtccgagcagagcaac
ggcggtcagaacaagggcgaccaggacaagggcggtcagaacaaggccgaccagggcagg
gcccagcaggagtcgtccaagggcggctcacggggtcgcggtcgcggttccgcctccggc
ggtcaggagggcggccagaagtccggcggtcagaagtccggcggtcagaacggcggcaac
caggactccggcggtcagaacagcggacgcggtcgcggcggccgcagccggggtcgtgga
cggggcgagacctcgacggccgagttcggtggcgtgaagaccatgcagggcggggacatg
acggtccgtctgcccagcccgccgaagccccgcaagggtgccctgcggatcgtcgcgctc
ggcggcatctccgaaatcggccggaacatgacggtcttcgagtacgactcgaagcttctg
atcgtggactgcggcgtcctgttccccagttccacggagcccggtgtggacctcatcctc
ccggacttcgggcacatcgaggaccgcctggaccaggtcgaggcgctcgtgctcacccac
gcccacgaagaccacatcggggcgatcccgtttctgctcaagttgcgcccggacatccct
gtggtgggctccaagttcaccctcgcgctggtggcggccaagtgccaggagcaccgcatc
aagccggtattccgcacggtcgacgagtccagcgtcagtgacttcggcaagttccaggtc
cgctacttcgacgtcaaccactcgatccccgagtgcctgggcgtggtcatcaaggccggc
gacaacacggtgatgatgtccggcgacatcaagctcgaccagctccccaccgacaagcgc
cccaccgacctgcccaagatgtcgcggttcggcgacgagggtgtcgacctgctgctcctg
gactccaccaacgcgaccacgccgggcatcagcccgtcggagtccggagtccggcccgcc
ctgcagcggctcatcgccgacgcgcgccagctcgtggtggtcgcctgcttcgcctccaac
gtctaccgcgtccagtccgtcgtcgacgcggccgccgccaccggacgcaaggtcgccctg
accggacggtccatgctccgcaacatggagatcgccctggagatgggcctcctcacggat
cccgacagggtcctggtggacatggacaccgcggccaagctgccctccgagaaggtcctc
gtgatgaccaccggtacgcagggtgaggccatggccgggctgtcccggatggcccgccgt
gagcaccggcagatcaacctctccgagggcgacacggtgctgttctcctcgtcgatcgtc
ccgggcaacgaggagtccgtcttcggcgtccagaacggtttgtcgcagatgggcgtgaac
gtggtcaccagccgtgaggcgaacatccacgtctccggccacggctattccggcgaactg
ctgttcatctacaacgccgtgcgtccgaagagcgccatgcccgtgcacggcgagtggcgg
catctgcgcgccaacaaggctctcgccgtggcgaccggggtgcccgaggagaacgtcgtc
ctcgcccagaacggggtggtcgtcgacctcgtcgacggcaaggcctccgtggtgggacag
gtgccggtcggcaacctgtacgtggacggcctgtccaccggcgacatcggcgacaccgtg
ctcgccgaccggaccgctctcagcgaggacgggttcatcgtcgcgacggtcgtggtcgat
ccgcgcaccggtcgccccgtgagcaagccgcagatcatcggcaagggcttcaccgacgag
ccgggcgctctcgccccggtggtcgagctggtggagaacgcgctgtgggatctcgccggc
gagggcgagacggacccgtaccggatcgcccaggccgtccggcgcaccgtcggtcgctgg
gtgtcggagaagtggcgccgcaagcccatgatcgtgccgaccgtcatcacctccgccgtc
gccgaggcctga
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