KEGG   Drosophila melanogaster (fruit fly): Dmel_CG42865
Entry
Dmel_CG42865      CDS       T00030                                 
Symbol
trh
Name
(RefSeq) trachealess, isoform D
  KO
K09098  neuronal PAS domain-containing protein 1/3
Organism
dme  Drosophila melanogaster (fruit fly)
Brite
KEGG Orthology (KO) [BR:dme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dme03000]
    Dmel_CG42865 (trh)
Transcription factors [BR:dme03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    Dmel_CG42865 (trh)
SSDB
Motif
Pfam: PAS_3 bHLH_HIF1A PAS_11 PAS PAS_9 PAS_4 HLH
Other DBs
NCBI-GeneID: 38065
NCBI-ProteinID: NP_001261207
FlyBase: FBgn0262139
UniProt: Q24119 M9PBG9
LinkDB
Position
3L
AA seq 1022 aa
MLPYQAAVAMDYAGYQRQPTPGHPGSHMATMGSLGMPAVPFTHSWMVPTQDLCAMPPYNK
MTGHQQPPGAGMHAQQQPLEPGILELRKEKSRDAARSRRGKENYEFYELAKMLPLPAAIT
SQLDKASIIRLTISYLKLRDFSGHGDPPWTREASSSSKLKSAAIRRSPAVDLFEQHQGTH
ILQSLDGFALAVAADGRFLYISETVSIYLGLSQVEMTGSSIFDYIHQADHSEIADQLGLS
LTSGGGGGGGSSSSGGGGGGAGGGMASPTSGASDDGSGTHGTNNPDVAASMTQASTSGYK
GYDRSFCVRMKSTLTKRGCHFKSSGYRASDATSNCNNGNNASNNAKNVKNPGSNYSVVLL
LCKLRPQYTFSHSRKSQPPLLGMVALAIALPPPSVHEIRLECDMFVTRVNFDLRVAHCEP
RVSDLLDYSPEDLVNKSLYSLCHAEDANRLRKSHSDLIEKGQVLTGYYRLMNKSGGYTWL
QTCATVVCSTKNADEQNIICVNYVISNRENENMILDCCQLEPSPDSIKHEEGLGNDKSSG
SPGGDASGEGNSHLSAGDMKLNSPKTDSEGHSHRGRGRSAAASHGSSMNSLTMIKDSPTP
LGVEIDSGVLPTTVATPVPAATPPVQSTKRKRKTKASQHAEDQGQEQVISEQPLPKLPTM
EQRDQQPRSRLPSIVDEQPSSAADSAVKDLEQAMSKHLPSPAAVVSVAPPNTDFSADSLL
KQQQQQQQLDPNEKSSTIQWIGTPYQQPPAPMPATALLRQLYANRESVIRATARQTPTGV
GPGVFYGDQQTGPLPTPPGSESSYENQYLQLHSAASGGHPGGQKTSADAFTNLVSTYGGY
HSSIDYHNAMTPPSSVSPRDSNQPGKAAPVLASNGGYDYAPDPLRGQYATSSGDVVPATL
PLKPQASYTATMHPSGSTTTEGGVTYSNLDQPQYFAPHSSFHLYHKGSPASGWYSTPSXV
VDDQGQVPPSCQDQYHHHHHHHHHQDGSAGSSASQASERWDFVGALGKVARMFFSARKGN
PG
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgttgccgtaccaggcagccgtggccatggactacgccggataccagagacagcccacg
cccggacatcccggaagccacatggccaccatgggatctctgggcatgcccgcggtgccc
ttcacccacagctggatggtgcccacgcaggacctttgcgccatgccaccctacaacaaa
atgaccggacaccagcagccgccaggtgccggaatgcacgcccagcaacagcccctcgag
cccggcatcctggagctgcgcaaggagaagtcgagggacgcggcgagatcgcggcgcgga
aaggagaactacgagttctacgagctagccaagatgctccctctgccggcagccatcacc
agccagctggacaaggcctcgatcataagactgaccatcagctacctgaagctgagggat
ttctccggacacggcgatccgccatggactcgggaagcctctagcagcagtaagctaaaa
agtgccgccattcgtcgcagccccgctgttgatttgttcgagcaacatcagggcacccac
atattacagtcgctggatggtttcgccctagctgtggcggcagacggacgcttcctgtat
atttccgagacggtgtccatctatttgggcctgtcgcaggtggagatgacgggtagcagc
atcttcgactatatccaccaggcggatcactcggagatcgccgaccagctgggcctgagc
ctaacaagcggcggcggcggtggcggtggaagctcgagcagcggcggaggaggaggcgga
gcgggaggtggtatggcctcacccacttccggagcctccgacgatggaagcggcacacac
ggtacgaacaatcccgacgttgcggcctccatgacccaagcttcgaccagcggctacaag
ggatacgatcgaagcttctgtgtccgtatgaagtccacgctgaccaagcgcggctgtcac
ttcaaatcctcaggctatcgggccagcgatgcaacgagcaattgcaacaacggtaacaat
gctagtaacaatgctaaaaacgttaagaatccgggctcaaactattcggtggttctgctg
ttgtgcaagctgcgtccccagtacacattttcccacagtcgcaaatcgcagcctccactc
ctcggaatggttgccctggccatcgcactgcctccgccatcggtgcacgagatccggctg
gagtgcgacatgttcgtcaccagggtgaactttgacctgcgagtagcccactgcgagcca
agggtatccgatctgctggactattccccggaggacctggttaacaagagcttgtactca
ctgtgtcacgccgaggatgccaatcgcctgcgcaagagccactcagacctgatcgagaag
ggtcaggtgttgaccggatactaccgactaatgaacaagagtggaggctacacttggctc
cagacctgtgccactgtcgtctgcagcacaaagaacgccgatgagcagaacatcatctgc
gtgaactatgtgatcagcaaccgggagaacgagaacatgatactggattgctgccaactg
gaacccagtccggatagcattaagcacgaggagggactgggtaacgacaaaagcagcggg
tcgccaggaggagatgccagtggcgaaggcaactctcacctgagtgccggagacatgaag
cttaactcaccgaaaaccgattcagagggccattcccaccgcggcaggggtcgcagtgca
gccgcctcgcatggaagttcaatgaacagcctcaccatgatcaaggatagccccactccg
ctgggtgtggagatcgattcgggagtgctgcccaccacagtggccactccagtgccggca
gccactccaccagtgcagtccaccaagcgaaagcgaaaaaccaaagcgtcgcagcacgcg
gaggaccagggtcaagagcaggtaatctccgagcagcctctgcccaaactaccgacaatg
gagcaacgcgatcagcagccccgcagccgcttaccctcgattgtggatgagcagccctcg
tccgcggccgactccgcggtcaaggatctggagcaggccatgtccaagcatctgccctcg
ccagcggcggtggtgtccgtggccccgcccaatacggatttcagtgccgactctctgctt
aagcagcagcaacaacaacagcagctggatcccaacgagaaaagcagcaccattcaatgg
ataggcactccctaccaacagccaccggcgcccatgccagctaccgcccttctccggcag
ttatacgccaaccgggagagcgtgatccgggcgacggctaggcaaacaccaactggagtg
ggccccggagttttctacggcgatcagcaaacaggtccgctgcccactccgccgggcagt
gagtcgtcctacgagaaccaatacctgcagctgcactctgccgcttccggtggacatcct
ggcggccagaagacctccgctgatgccttcaccaatctggtgtcaacctacggcggctat
cacagctccattgactatcacaacgccatgaccccgcccagttcagtgtctcccagggac
tcgaatcaaccgggtaaggcggctccagtcctggcctccaacgggggatacgactatgcc
cccgatccactccgagggcagtacgccacttcatccggagacgtggtgcccgccacgctg
cctctgaagccccaggcatcctatacagcaacaatgcatccttcgggcagcacaaccacc
gagggtggagttacctacagtaatctcgaccagccgcagtacttcgctccgcattcgagt
ttccacctttaccacaagggcagcccggccagcggctggtactccacgccctcctaggtg
gtagacgaccaggggcaggtcccgccatcctgtcaggaccagtaccaccaccaccaccac
caccaccatcatcaagacggatcagcgggatccagtgcaagccaggcgagcgagcgatgg
gactttgtgggtgcgctgggcaaggtggccaggatgttttttagcgccagaaagggtaat
ccgggatag

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