KEGG   Drosophila melanogaster (fruit fly): Dmel_CG8777
Entry
Dmel_CG8777       CDS       T00030                                 
Symbol
CG8777
Name
(RefSeq) uncharacterized protein
  KO
K12600  superkiller protein 3
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dmel_CG8777 (CG8777)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dme03019]
    Dmel_CG8777 (CG8777)
Messenger RNA biogenesis [BR:dme03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     Dmel_CG8777 (CG8777)
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_16 TPR_8 TPR_14 TPR_12 TPR_11 TPR_CcmH_CycH TPR_9 TPR_19 ANAPC3 TPR_17 ARM_TT21_C RNPP_C HisK-N-like Hisat_C
Other DBs
NCBI-GeneID: 35921
NCBI-ProteinID: NP_610452
FlyBase: FBgn0033376
UniProt: Q6NNB2
LinkDB
Position
2R
AA seq 1233 aa
MSAVKESKALIKDIRETIKLGKHAEAIPKCQRLLKSEPENAMGYLLLGAAYQNIDKAEAA
KNLRQCIKCTDGPAPAALLGLANCAPSNELPEIYDQLADLQPEQSLNYWEKLFNLASDSN
VAPFCFTVLKKRVQDTENGNFTKIQEYLGRIWVSNDFEIAPEDTQLYKTTMEALLQNSEP
SARSVVYKRYLKWLYKKQDYETCVRHACNMTESHPKDVYGFEWICKTYCEHHEQSEIVSW
QQELRHPIQVYAEQLLELNPNSNLALLVKALDLFAEGQVVASRQLALQAQKSQPAYKVTL
ELLARIHMELGAYKLALQLWQEIGQENDAYALCLSHEKGVSKLREAVTILQTLENSEGNI
KSLARCYFKLGELHLLKDLPLDDLTKAEFVLSPSEALQEIADCKTFEAYLLCGKLHMALK
NYSDALNYVLKATRLRPHFAECFDYLGKLYPLATGDFSRARKCYEKCISLNPLAEEAVDA
LSFIYQEQGEEELNETLLLNTLSHLGSNESIRLQYKLGLHFSHVKKWDSAIQCFRIAIKN
DSRCISYWESLGDAYAGRGSYNSAIRVFQKILELSPENNYALLQIASVKTTIRMYTESIE
DYDTLLQRNPTYLPGLRGAAEAHIGIANSLKSQNLYGRSKAHFQLALEHLQSAFLQREAQ
GMVWLWRLSANIFVQTAQLPHSLANLDVAGNLAKREEPIAYLSRKDLLQLAQRFYLCALK
LKQNTYLWYELSLASYYSAILIPEDANGHLETATKACKMAIKECSNRWQNWNLLGVINMN
SENENLPLAQHCFIQAVVLEKKCYTAWTNLGVLYIKLNEVRLANEAFTRAQQSSPVYANA
WIGQAMVAELIGDREEAFDLFRHCQQFDYHPEAALGFAHWVCEMLSTPGSFDKPRIKHAI
EHMYADVLALDAINWYVQNEETDATPASLSFQGFLYARKNLYRQAIEAFTRACKLCEPGA
DRDKLYTNLGYLYLKIDQPEQAAHALNTVAHATFKPIIGLAQAYYLAGQLQESYSIYNSV
LGNVVDHGDDKAATILVAMASMIYDFQGEADTKTLLYQCVLLKEVPIQALFSALALGILH
RDNALIHTILTELNAYAFKKEYCADISYLTAHYILINEGARRALCYLQTRIRMFPNSRSL
RSVVLKFLLDYFSDDQSYRLATSNMGRITLTLGHTKQQNSILASEEALTTIYASQAVSAV
DKTCSMKLLQRAILLSPTDQRARQLLSAIIANS
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgagcgccgtaaaagagtcaaaagccttgatcaaggacattcgggagaccataaagctg
ggcaagcatgcggaagccatacccaagtgccaacgcctacttaaatcggagcctgaaaat
gctatgggctacttgttgcttggggcagcctaccagaatatcgacaaggcggaggcggcc
aaaaacctgaggcagtgcatcaagtgcacggatggtccggcccctgccgcgctcctcgga
ctcgccaactgcgcgcccagcaacgaactgcctgaaatctatgatcagttggctgacctg
caaccagaacaatccttgaactattgggaaaagcttttcaacttggcctctgactcaaat
gtggctcctttctgcttcactgtacttaaaaagagagtgcaggacacagagaatggaaat
tttacgaaaattcaggagtatctgggacgcatttgggtttcaaacgactttgaaattgcg
cccgaagatactcagctttacaaaacgactatggaagctctgctgcagaactctgaaccc
agtgcaaggagcgtggtttacaagcgatacctgaagtggctttacaagaagcaggattat
gagacttgcgtgcggcacgcctgcaatatgaccgagtcgcatcccaaagatgtctatggc
ttcgagtggatatgcaagacctactgcgaacaccacgagcaatccgaaatagttagttgg
caacaggagctgaggcatcccattcaggtgtacgctgagcagcttctggagcttaatcct
aactctaaccttgctttgttggttaaagccctggatcttttcgctgaggggcaggtcgtc
gcatccaggcagttggcattgcaggcacagaaaagtcaacctgcgtacaaagtaacgctg
gaattgctggctcgtatccacatggagctgggcgcatacaagttggcccttcagctgtgg
caggaaattggacaggaaaacgacgcttatgctctatgcttatcgcacgaaaaaggcgtt
tcaaaactaagagaagctgtcacgattttacaaacgcttgaaaactccgagggcaatatt
aagtctttggctcgctgctacttcaagctgggcgaactgcacttgctgaaagatttgccc
ttggatgatctgaccaaagcagaatttgttttatctccatctgaagctcttcaagaaatt
gctgactgtaagacttttgaggcatacctactttgtggcaagctgcatatggcgctgaaa
aactattcagacgctctaaattatgtgttaaaggccactcgactgcgcccacactttgcc
gagtgctttgactatctgggcaagctgtacccgctggccactggggacttctcacgagcc
cgcaagtgctacgagaagtgcataagccttaatcccctcgctgaggaagctgtggatgcc
ttgagctttatctaccaagaacagggcgaggaggaactgaacgagaccctgctgctgaac
acattgagccatttgggtagcaatgaatcaattcgattgcagtacaagctgggtctgcat
ttctcgcatgtgaagaagtgggacagtgcaatacaatgctttcgcattgccattaagaat
gactcccgctgcattagctactgggagtcattgggtgatgcttatgcgggacgcggctcg
tacaactcggctattcgagtctttcaaaagatccttgaactatctccggagaataattat
gccctgcttcaaatagcttcagtgaaaacgacaatacgcatgtacactgaatctattgaa
gattacgatacgctgctacaacgtaatcctacttacctgcccggacttcgaggtgctgct
gaagcgcatattggcattgcgaatagtttgaagagccagaacttgtacggaagatccaaa
gcgcatttccaattggctctggaacaccttcaaagcgccttccttcagcgtgaagctcaa
ggaatggtttggctatggcgcctctcagctaacattttcgttcagacagcccagttgccg
cattcgttggccaacttggatgtggctggaaacctagccaagcgcgaagaacccattgca
tatctttcacgcaaggatcttctacagctagctcagcgcttctacttgtgcgccttaaaa
ctgaagcagaatacgtacctgtggtacgagctatcgttagccagctactacagtgccatt
ctcatacccgaggatgcaaacggccacttagagacggcgactaaggcgtgcaaaatggcc
attaaggagtgtagcaacagatggcaaaattggaatcttctcggagttatcaatatgaac
tccgaaaatgagaacttgccattggcacagcactgttttattcaggctgtagtgctggaa
aaaaagtgctacacagcgtggaccaatctcggagttctctatattaaactgaatgaagtc
cgattggccaacgaggcctttacgagagcccagcaatcaagtcccgtgtacgccaacgct
tggattggacaagcaatggttgcggagttgattggcgatcgcgaggaagcctttgatctg
tttcgtcactgccagcagttcgattaccatccggaggcggcgcttggatttgcgcattgg
gtgtgcgaaatgctgtcgactcctggatctttcgacaagccgcgcataaagcatgccatc
gaacacatgtacgctgatgtgcttgcgctggatgccatcaattggtatgtgcaaaacgag
gagacggatgcgacaccagcatcgctgtcgttccagggatttctctacgcccggaaaaac
ctgtatcgccaagcaatcgaagccttcactcgggcgtgtaagttgtgcgaacctggagcg
gatcgtgacaagctctacacgaatctgggatacctgtacttaaaaatagaccagccggag
caggcggcacacgccctaaacacggttgcacatgccacatttaagccgatcattggcctg
gcccaggcatattatctagccggtcagttgcaggaatcctactctatttacaactccgtt
ctcggcaacgtggttgatcatggcgatgacaaagcagctaccatcctcgtggctatggca
tccatgatttacgactttcagggcgaagcggacaccaaaaccctactctatcagtgtgtc
ttgttgaaggaggtccccattcaggcgttgttttcagcccttgccctaggtatacttcat
agagataatgcgttgatccatacgatactgacggagctgaatgcgtacgcctttaagaag
gagtattgtgccgacatatcctatttaacggctcactacatcctgataaatgagggtgcc
cgaagagcgttgtgctatctacagactcgcatacgaatgtttcccaattcccgaagtctg
cgaagtgtcgtgctaaagtttcttcttgattatttctctgatgaccaatcctatcgactg
gctacttcaaatatgggtcgaataactcttactctgggacacactaagcaacaaaatagc
atcttggccagcgaagaggcactgaccactatatatgccagtcaggcggttagtgcagta
gacaaaacctgttctatgaagttgttgcagcgcgccatactgctaagcccaactgaccag
agagccagacaattactttccgctattattgcaaattcatga

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