KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138808381
Entry
138808381         CDS       T11079                                 
Symbol
Sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138808381 (Sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dmer03041]
    138808381 (Sf3a1)
Spliceosome [BR:dmer03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    138808381 (Sf3a1)
 Complex B
    138808381 (Sf3a1)
 Complex C
   U2 SnRNP specific factors
    138808381 (Sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 138808381
NCBI-ProteinID: XP_069850646
LinkDB
Position
Unknown
AA seq 793 aa
MPAGPVQAVPPPPPVATEPKQPTEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQTTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFGKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPASKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAI
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgcctgctggacccgtgcaggcggtgcctccgccgccgccggtggccacggagcctaaa
cagccaactgaagaagaagcatcttcaaaggaggattctaccccttccaagccagtggtg
gggattatttaccctcctccagaagtcagaaatatcgttgacaagactgccagctttgtg
gccagaaatgggcctgaatttgaagctagaatacgacagaatgagatcaacaaccccaag
ttcaacttcctgaaccccaacgacccttaccatgcctactatcgccataaggtcagcgaa
ttcaaggaggggaaagctcaggaaccttcagctgccatccccaaggtcatgcagcagcag
cagcaaactacccagcagcagctgccccagaaggtccaagcccaggtgatccaagagaca
attgtgcccaaagagccccctcctgagtttgagttcatcgctgaccctccttccatctca
gccttcgatcttgatgtcgtgaagttgacggctcagtttgtggccaggaatgggcgccag
tttctgacccaactgatgcagaaagagcaacgcaactaccagtttgactttctccgccca
cagcacagtctcttcaactacttcacgaagctggtggaacagtataccaagattttgatt
ccacccaaaggcttgttcggaaagctcaagaaagaggctgaaaatccccgagaagtcttg
gatcaggtgtgttaccgagttgagtgggccaagttccaggagcgtgagaggaagaaggaa
gaggaggagaaggagaaggagcgggtggcctatgctcagattgactggcatgattttgtg
gtagtggagacagtggacttccagcccaacgaacaagggaacttcccacccccaaccacc
ccagaggagttgggggcccgcatcctcattcaggagcgctatgagaagtttggggagagt
gaggaggtggagatggaggttgagtctgatgaggaagatgagaaacaggagaagactgag
gaacctccttcacagctggatcaggacactcaagtacaggacatggatgagggttcagat
gatgaagaagaagggcaaaaggtacctccacccccagagacgccaatgcctccgcctctg
cccccaactccagaccaagtcattgtacggaaggactacgatccgaaagcttccaagcct
cttcctccagcccctgcaccagatgagtatcttgtgtcccccattactggggagaagatc
cctgccagcaaaatgcaggaacacatgcgcattgggcttcttgatccccgctggctggag
cagcgggatcgctccatccgcgagaagcagagtgatgacgaggtttatgcaccaggtctg
gatattgagagcagcttaaagcagttggctgagcgacgtactgacatctttggtgtggag
gaaacggccattggtaagaagataggtgaggaggagatccagaagccagaggaaaaggtg
acctgggatggtcactcaggcagcatggctcggacccaacaggctgcccaggccaacatc
accctgcaggagcagattgaggccatccacaaagctaagggcttggtgccagaagatgac
accaaagagaagattggccccagcaagccaaatgaaatcccacagcagccaccacctcca
tcttcagccaccaacatccccagctcagcaccacccatcacctcggtgccccggccgcct
gcgatgccgcctcctgtccgtactacagttgtatctgcagttcctgtcatgccccggcca
ccgatggcatctgtggtccgactgccccctggctcagtgatcgcccccatgccacccatc
atccatgcgcccagaatcaacgtggtgcccatgcctccctcagcacctcctatcatggca
ccccgtccacctcccatgattgtaccaacagcctttgttcctgccccacctgtggctcct
gtcccagctccagcccccatgcccccagtccaccccccacctcccatggaggatgagcct
gcctccaaaaaactgaagacagaggatagcctcatgccggaagaggagttcctgcgcagg
aacaagggtcctgtgtctatcaaagtgcaagtgcccaacatgcaggataagacggaatgg
aagctgaatgggcaagtgctggtcttcaccctcccgcttacagaccaggtctctgtcatc
aaggtgaagattcacgaagccacaggcatgcctgcagggaaacagaagctacagtatgaa
ggcatcttcatcaaggattccaactcactggcttattacaacatggccaacggagccatc
atccacctggccctcaaggaaagaggtggcaggaagaagtag

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