Dipodomys merriami (Merriam's kangaroo rat): 138813783
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Entry
138813783 CDS
T11079
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmer03019
]
138813783
Messenger RNA biogenesis [BR:
dmer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138813783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
DUF6079_1st
URGCP_GTPase
Motif
Other DBs
NCBI-GeneID:
138813783
NCBI-ProteinID:
XP_069858308
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MSESGHSQPGLYGMERRRRWKDPGSIGPQNLSGPGGRERDYLAPWERERRDASEDSSAAL
MQKTPIILSKPPAERSKQPPPPAAPALPPAPAPLEKPIVLMKARDEGKGPPTTGAPTPEG
AAPPPAAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPTAMDPVVGQAKLLPPERMKHSI
KLVDDQMNWCDSAIEYLLDHTDMLVVGVLGLQGTGKSMVMSLLSGNTPEEDQRAYVFRAQ
SAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVE
MQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSAGSEEGT
EYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPDF
LDSEVNLFLVPFMDSEAESENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSMA
RPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtcggggcacagtcagccagggctctacgggatggagcggcggcggcggtgg
aaggatccaggctccatcggcccccagaatctctctgggcctggcggtcgcgagagagac
taccttgcaccgtgggagagagagaggcgggacgccagtgaggactcgagcgcggcccta
atgcagaagacgcccatcatcctgtccaagccccccgcagagcggtccaagcagccgccc
ccacccgcagcccccgccttgccccccgcccctgcccccctggagaagcccatcgtgctc
atgaaggcccgggatgaggggaaggggccccccaccacgggcgcccccacccctgagggc
gctgccccaccccccgccgccgccccagcgccacccaagggagagaaggaggggcagaga
cccacgcagcctgtgtaccagatccagaaccgcggcatgggcacggccgcccccaccgcc
atggaccctgtcgtgggccaggccaaactgctgccccctgagcgcatgaagcacagcatc
aagctggtggatgaccagatgaactggtgcgacagtgccatcgagtatctgctggatcac
accgacatgctagtggtcggcgtcctgggtctccaggggacaggcaagtccatggtgatg
tccctgttgtcaggcaacaccccagaggaagaccagagggcctacgtgttccgggcccag
agtgctgagatgaaggaacgagggggcaaccagaccagcggcatcgacttcttcatcaca
caggagcggatcgtgttcctggacacacagcccatcctgagcccctccatcctggaccac
ctcatcaacaacgaccgcaagctgccccccgagtacaaccttccccacacctacgttgag
atgcagtccctgcagatcgctgccttcctcttcactgtctgccatgtggtgattgtggtc
caggactggttcacagacctcagtctgtacagattcctgcaaacggcggagatggtaaag
ccctctaccccgtcgcccagccatgaatccagcagctccgcgggctccgaggaaggcact
gagtactacccacacctggtctttctgcagaacaaggctcgtcgggaggacttctgcccc
cggaagctgcgccagatgcacctgatgatcgaccagctcatggcccactcccacctgcgg
tacaaggggaccctgtccatgctccaatgcaacgtcttcccgggactgccgcccgacttc
ctggactccgaggtcaacctgttccttgtgcctttcatggacagcgaggcggagagcgag
aacccgccccgagcaggacctggttccagcccacttttctccctgctgcctgggtaccgg
ggccaccccagtttccagtccttggtgagcaagctccggagtcaggtgatgtccatggct
cggccacagctgtcccacaccatcctcaccgagaagaactggttccactacgccgcccgc
atctgggacggggtgaagaagtcctccgccctggcagagtacagccgcctgctggcctga
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