Dipodomys merriami (Merriam's kangaroo rat): 138814090
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Entry
138814090 CDS
T11079
Symbol
Trpc4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04360
Axon guidance
dmer04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
138814090 (Trpc4)
09158 Development and regeneration
04360 Axon guidance
138814090 (Trpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dmer04040
]
138814090 (Trpc4)
Ion channels [BR:
dmer04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138814090 (Trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
138814090
NCBI-ProteinID:
XP_069859020
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKSYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSVFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLVKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTIQSASATKESSNSADSDEK
SDSEGHGKDKKKNLSLFDLTTLIHPRSAAIASERRTISNGSALAVQGPPREKQRKVNFVA
DIKHFGLFHRRPKQSTAEPTTNPIFSVSEEVARQQAAAGPSESGIALGSRGLGARGDPNL
PGLSEQCVLVDHRERNSDSLGVQMSKRVCTFTSEKVVVEDTVPIIPKEKHARDEDASLDY
DLHLKDTVSHEDYVTTRL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattataaaagaaatgtgaatgccccttatcgagaccgcattcctcta
aggatagtccgagcagaatctgaactttctccctcagaaaaatcctacctgaatgcagtg
gaaaaaggagactatgcaagcgtgaagaagtccctagaggaagccgagatttattttaaa
atcaatattaactgcattgatcctcttggaagaactgctcttctcatagcaattgaaaat
gagaacttggagctcattgaactgctcttaagcttcaatgtctacgtgggagatgctttg
ctacatgccatcagaaaagaggtggtgggagccgttgagctgttactgaaccacaaaaag
ccaagtggagaaaaacaggtacctcccatactcctggataagcagttctccgaattcaca
ccggacattacaccaatcatcttggcagctcatacaaataattacgagataataaaactt
ttggttcaaaaaggtgtttcagtgccccgaccccatgaggtccgctgtaattgcgtggaa
tgcgtctccagttccgacgtggacagcctccgacattcacgatcccgcctcaatatctac
aaggccttggccagtccctctctcattgccctgtccagtgaagaccctttcctcacagcc
tttcaattaagttgggagcttcaagaactgagcaaggtggaaaatgagttcaagtccgag
tatgaggagctgtccagacagtgcaaacaatttgccaaggatctgttggatcagacaaga
agctccagagaactggaaatcattcttaattaccgagatgacaatagtctgattgaagaa
caaagtggaaatgatcttgcaagactgaaattagccattaagtaccgtcaaaaagagttc
gtggcgcagcccaattgtcaacagcttctcgcctctcgctggtacgatgagttcccgggc
tggaggaggagacactgggcagtgaagatggtgacgtgtttcataataggactgcttttc
cccgtcttctctgtgtgctacctgatagctcctaaaagcccacttggactgttcatcaga
aagccatttatcaagtttatctgccacacagcctcctatttgacctttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacag
atgtgggatggtggccttcaagattatatccatgattggtggaatctaatggattttgtg
atgaattccttatatttagcaacaatttctttgaagatcgttgcatttgtaaagtacagt
gctctaaatccacgagagtcatgggacatgtggcaccctactctggtggctgaggcttta
tttgccattgcaaatatcttcagttccctacgtctgatctcactgttcacggcaaattct
cacctgggacctctacaaatatctctgggaagaatgcttctggacattttgaagttcctc
ttcatctactgccttgtgttgttagcatttgcaaatggcttgaatcagttgtacttttat
tatgaagaaacgaagggcttaagctgcaaaggcatacggtgtgaaaaacagaataatgca
ttttcaacgttatttgagacactgcaatctctcttttggtcagtatttgggctcatcaat
ttatatgtgaccaatgtcaaagcacagcatgaattcactgagtttgtgggcgccaccatg
tttgggacatacaatgtcatctctctggttgtcctactcaatatgttaatagcaatgatg
aacaattcttaccaactaattgctgaccatgcagatatagaatggaaatttgcacgaaca
aagctgtggatgagctactttgaagaaggaggtactctgcctacaccttttaatgtcatt
ccaagccctaagtccctgtggtacctggtcaaatggatatggacacacctgtgcaagaaa
aagatgagaagaaagccagaaagttttggaacaatagggaggcgagctgctgataatttg
agaagacatcaccaatatcaagaagtgatgaggaacctggtgaagagatatgttgctgcc
atgattagagatgctaaaacagaagaagggctgacagaagagaactttaaggaactaaag
caagacatttctagcttccgctttgaagtcctgggattgttaagagggagcaaactatcc
accatccaatccgccagcgccaccaaagagtcttccaactccgcggactcagacgagaag
agtgacagcgaaggtcacggtaaggacaagaaaaagaacctcagcctctttgacctgacc
accctaattcatccgaggtccgcagccatcgcgtcggagagacgcaccatcagcaatggc
tctgctctggcggtgcagggcccacccagggagaagcagaggaaagtgaattttgtggct
gatatcaaacacttcgggttgtttcacagacgccccaaacaatccacggcggagcccacg
acaaaccccatcttctcggtttcagaagaagtggcccggcagcaggcggccgcgggaccc
tctgagagcggcatcgcgctgggatcgcggggcctcggggccaggggggaccccaacctc
cccggcctcagtgaacagtgtgtgctagtggaccatagggaaaggaattcggactccttg
ggtgtgcagatgagcaagagagtgtgtacgttcacgtccgagaaagtggtggtggaggac
acggtgcccatcatccccaaggagaaacacgcgagggatgaggatgccagcctagactac
gacttgcacctcaaggacaccgtcagccacgaagactatgtgacgaccagattgtga
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