Dipodomys merriami (Merriam's kangaroo rat): 138816679
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Entry
138816679 CDS
T11079
Symbol
Crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
dmer Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138816679 (Crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmer03041
]
138816679 (Crnkl1)
03036 Chromosome and associated proteins [BR:
dmer03036
]
138816679 (Crnkl1)
Spliceosome [BR:
dmer03041
]
Complex B
Other components
Prp19-related factors
138816679 (Crnkl1)
Complex C
138816679 (Crnkl1)
Chromosome and associated proteins [BR:
dmer03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
138816679 (Crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_16
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
138816679
NCBI-ProteinID:
XP_069862774
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELN
DYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLK
YAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQP
EEQAWHSYINFELRYKEVERARTIYERFVLVHPDVKNWIKYARFEEKHAYFAHARKVYER
AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIPKHEAQDLFKNYTIFEKK
FGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAIANV
PPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQ
FEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT
SWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQ
LLQRTQHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEKEERLMLLESWRSF
EDEFGTVSDKERVDKLMPEKVKKRRKVQTDDGSDAGWEEYYDYIFPEDAANQPNLKLLAM
AKLWKKQQQEKEAAEQDPDKDIDESES
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccaccgcggccgggaagcagcggattcctaaagtggccaaggtaaaaaac
aaagctccagctgaagtacagataactgctgaacaactcttaagagaagctaaagaacga
gagcttgagcttctcccacctccacctcaacagaagatcacagatgaagaagaattaaat
gattacaagctaaggaaaaggaagacatttgaagataacataagaaaaaacaggactgtg
attagtaactggataaaatacgcacaatgggaagaaagtctaaaggaaattcaaagggcc
cgatccatatacgagcgtgctttagatgtagactatcgaaatattacactctggctgaaa
tatgcagaaatggaaatgaagaatcgccaggtcaatcatgcccgaaatatctgggaccgt
gccataacaacactgccacgagtcaatcagttctggtacaagtacacatatatggaggag
atgttggggaacattgctggtgcccggcaggtgtttgagcgctggatggaatggcagcct
gaggagcaagcctggcactcctacattaactttgagctgagatacaaagaggtggagcgg
gcacgtaccatttatgaacgatttgttcttgtgcacccggatgtgaaaaactggatcaag
tatgcccgctttgaagaaaaacatgcttatttcgcccatgcaaggaaagtgtatgagaga
gctgttgagttctttggagatgaacatatggatgaacacctttatgtggcctttgccaaa
tttgaggaaaaccagaaagaatttgaaagggtacgagtcatctacaagtatgccttagat
agaattccaaaacatgaggcccaagatctcttcaaaaactatactatctttgagaagaag
tttggtgacaggcggggtattgaagatatcatcgtgagcaaacggagattccaatatgaa
gaggaagtgaaggctaatccacataattatgatgcgtggtttgattacttgcgcttggtg
gaaagtgatgcagaagctgaaacggtgcgagaggtttatgagcgagccattgccaacgtc
ccccccattcaggagaagaggcactggaagcgctatatatatctttggatcaactatgcg
ctctacgaagagttagaggcaaaggatcctgagaggacaagacaggtatatcaagcctct
ttggaattaattcctcataaaaagttcacatttgccaaaatgtggttatattatgcacaa
tttgaaataagacagaaaaatttaccatttgccagaagagctttgggaacttctataggc
aaatgtccaaagaacaagttatttaaaggctacatagaattggaactacagcttcgagaa
tttgacagatgtcggaagctttatgaaaagttcttggaatttggacctgaaaattgtacc
tcatggattaaatttgcagaattagagacaatccttggtgatattgagagagcccgggca
atctatgaattagccatcagccagccacgcttagacatgccagaggtgctttggaaatca
tacattgactttgaaattgagcaggaagaaactgaaagaacacgaaatctttaccgacaa
ttgctccagagaacacaacatgtcaaggtatggatcagttttgctcagtttgagctgtcg
tcaggaaaagaaggaagtgtggctaaatgcagacagatttatgaagaggctaacaaaacc
atgcggaattgtgaagaaaaggaagagagacttatgttgctagaatcttggagaagcttt
gaagatgaatttggaacagtatcagataaggagagagtagacaaactcatgccagagaaa
gttaagaagagaagaaaggtccagactgatgatgggtctgatgcaggctgggaagaatac
tatgactacatctttccagaagatgctgccaaccaacctaacctcaagcttctggctatg
gccaaactttggaagaaacaacaacaggaaaaagaggctgctgagcaagaccctgataaa
gacattgatgaaagtgaatcttga
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