KEGG   Dipodomys merriami (Merriam's kangaroo rat): 138840336
Entry
138840336         CDS       T11079                                 
Name
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
dmer  Dipodomys merriami (Merriam's kangaroo rat)
Pathway
dmer04145  Phagosome
dmer04210  Apoptosis
dmer04517  IgSF CAM signaling
dmer04530  Tight junction
dmer04540  Gap junction
dmer04814  Motor proteins
dmer05010  Alzheimer disease
dmer05012  Parkinson disease
dmer05014  Amyotrophic lateral sclerosis
dmer05016  Huntington disease
dmer05020  Prion disease
dmer05022  Pathways of neurodegeneration - multiple diseases
dmer05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:dmer00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    138840336
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138840336
  09143 Cell growth and death
   04210 Apoptosis
    138840336
  09144 Cellular community - eukaryotes
   04530 Tight junction
    138840336
   04540 Gap junction
    138840336
  09142 Cell motility
   04814 Motor proteins
    138840336
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    138840336
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    138840336
   05012 Parkinson disease
    138840336
   05014 Amyotrophic lateral sclerosis
    138840336
   05016 Huntington disease
    138840336
   05020 Prion disease
    138840336
   05022 Pathways of neurodegeneration - multiple diseases
    138840336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmer03019]
    138840336
   03036 Chromosome and associated proteins [BR:dmer03036]
    138840336
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dmer04812]
    138840336
   04147 Exosome [BR:dmer04147]
    138840336
Messenger RNA biogenesis [BR:dmer03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     138840336
Chromosome and associated proteins [BR:dmer03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     138840336
Cytoskeleton proteins [BR:dmer04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    138840336
Exosome [BR:dmer04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138840336
  Exosomal proteins of other body fluids (saliva and urine)
   138840336
  Exosomal proteins of colorectal cancer cells
   138840336
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 138840336
NCBI-ProteinID: XP_069896557
LinkDB
Position
Unknown
AA seq 449 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSADGEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctccatccacgttggccaggctggtgtccagattggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcctgatggccagatgccaagtgacaag
accatcgggggaggagatgactccttcaacaccttcttcagtgagacaggcgctggcaag
cacgtgcccagggcagtgtttgtagatctggaacccacagtcattgatgaagttcgaact
ggcacctaccgtcaacttttccaccctgagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgtggtcactacaccattggcaaggagatcattgacctcgtcttggac
cgaattcggaagctggctgaccagtgcacaggtcttcagggcttcctggtcttccacagc
tttggtgggggaactggctctggcttcacctccctgctgatggagcgtctctctgtggac
tatggcaagaagtccaagctggagttctccatttaccccgccccccaggtgtccacagct
gtagttgagccctacaactctatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtggacaatgaagccatctatgacatctgtcgtagaaaccttgatattgag
cgcccaacctacactaacctgaaccgccttattagccagattgtgtcttccatcacagct
tccctgaggtttgatggggccctgaatgttgacctgacagaattccagaccaacctggta
ccctatccccgcatccacttccccctggccacatatgcccctgtcatctctgctgagaaa
gcctaccatgaacagcttactgtagcagagatcaccaatgcttgctttgagccagccaac
cagatggtgaaatgtgaccctcgccatggtaaatacatggcctgctgcctgttgtaccgt
ggtgatgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgtacc
atccagtttgtggattggtgtcccactggtttcaaggttggcatcaattaccagcctccc
actgtggttcctggtggagacctggccaaggtgcagcgtgctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgtccactggtatgtgggtgaggggatggaggaaggagagttttctgag
gcccgtgaggacatggctgccctagagaaggattatgaggaggttggagcagatagtgct
gatggggaagatgagggtgaagagtactag

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