KEGG   Desulfosporosinus meridiei: Desmer_2468
Entry
Desmer_2468       CDS       T02207                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
dmi  Desulfosporosinus meridiei
Pathway
dmi02024  Quorum sensing
dmi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dmi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Desmer_2468
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Desmer_2468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmi03019]
    Desmer_2468
   03036 Chromosome and associated proteins [BR:dmi03036]
    Desmer_2468
Messenger RNA biogenesis [BR:dmi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Desmer_2468
Chromosome and associated proteins [BR:dmi03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Desmer_2468
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AFQ44386
UniProt: J7J0B2
LinkDB
Position
complement(2591398..2591655)
AA seq 85 aa
MNKSPINLQDTFLNQVRKENLPVTIYLVNGFQLKGLIKGFDNFTVVIEFEGRQQMVYKHA
ISTVMPIRPINLAAATAAESNPIKG
NT seq 258 nt   +upstreamnt  +downstreamnt
atgaacaaatcgcccatcaatttacaagatacttttttaaatcaggtacgtaaggaaaac
cttcctgtgaccatatatttggtaaacggttttcaacttaagggacttattaaaggattt
gataacttcacggttgttattgagtttgaaggcagacaacagatggtttataagcatgct
atctctacggttatgccgatacgcccaattaacctagctgctgccactgcagcagaatcc
aatccaataaaaggataa

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