Desulfosporosinus meridiei: Desmer_2468
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Entry
Desmer_2468 CDS
T02207
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi02024
Quorum sensing
dmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Desmer_2468
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desmer_2468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmi03019
]
Desmer_2468
03036 Chromosome and associated proteins [BR:
dmi03036
]
Desmer_2468
Messenger RNA biogenesis [BR:
dmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Desmer_2468
Chromosome and associated proteins [BR:
dmi03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Desmer_2468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AFQ44386
UniProt:
J7J0B2
LinkDB
All DBs
Position
complement(2591398..2591655)
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AA seq
85 aa
AA seq
DB search
MNKSPINLQDTFLNQVRKENLPVTIYLVNGFQLKGLIKGFDNFTVVIEFEGRQQMVYKHA
ISTVMPIRPINLAAATAAESNPIKG
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcgcccatcaatttacaagatacttttttaaatcaggtacgtaaggaaaac
cttcctgtgaccatatatttggtaaacggttttcaacttaagggacttattaaaggattt
gataacttcacggttgttattgagtttgaaggcagacaacagatggtttataagcatgct
atctctacggttatgccgatacgcccaattaacctagctgctgccactgcagcagaatcc
aatccaataaaaggataa
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