Daphnia magna (water flea): 116916413
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Entry
116916413 CDS
T07514
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116916413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dmk03021
]
116916413
Enzymes [BR:
dmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116916413
Transcription machinery [BR:
dmk03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116916413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Cu-oxidase_2
Motif
Other DBs
NCBI-GeneID:
116916413
NCBI-ProteinID:
XP_032777550
LinkDB
All DBs
Position
LG2:1182604..1187606
Genome browser
AA seq
1134 aa
AA seq
DB search
MGEAKKDMYVDLEKLLQPIKAVEEKWKLVPAFLKTKGLVKQHIDSYNYFINTDIKKIVKA
NEKVVSHADQTFYIKYLDIHVGKPDSIEDMNHSRLTTPHECRLRDMTYSAPVTVDIEYTR
GQQRIVRNGIPIGRMPIMLRSSNCALAGISPAEMAKKNECPYDCGGYFIVRGNEKVILIQ
EQMSKNRMIVEEDRKGNMSCQVTSSTHGTKTRTNVVVNKGKYYLKQNSFQDDIPVAVVFK
AMGIVSDQEIVQMIGTDDRVMTSFAPSLEECVRASIFTQQQALRHLGNKLRQKRFFGGPK
KTATEEARETLATTILAHVPVENFNFKAKAMYLALMIRRVIQAENDPSSVDDRDYYGNKR
LELAGSLLSLLFEDLFKRMNFELKQIADKNIPKIKAAQFDVIKHIRTDHITMGLENAIST
GNWTIKRFRMDRQGVTQMLCRLSYISGLGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEGCGLVKNLALMTHITTEAEEEPIIRIAQNMGVEDINLFSGEEISDPNVYTVFL
NGNILGLVKNYQRLIRYFKLARRHGYINAFVSIYPHFQTRSVYISCDGGRLCRPYIIVRK
GKPAVTEKHMQELADSFRTFEDFIYDGLIEYLDVNEENDSNIAVYESDITDESTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIACNQRNRIDTLLYNLVYPHKPMVK
TRTIELINFENLPAGQNAMVAVMSYSGFDIEDATVLNKASLDRGYGRCLVYKNAKCALKR
YNNQSSDRVNGPMIDAITKKPIWKHEILDADGFASVGQPVQPKQILINKAMPTAPVVAVT
PGAPAAVPLPEYRDVPITYKGAIPSYVEKVMFSSNAEEAHIIKIQLRQTRRPEIGDKFSS
RHGQKGVTALIAEQEDLPFTELGICPDVIMNPHGFPSRMTVGKLIELLAGKAGVLEGKFH
YGTAFGGSKVQDVSEELIKHGFNYQGKECMTSGTTGEQLTAYIYFGPVYYQKLKHMVMDK
MHARSRGPRAVLTRQPTEGRARDGGLRLGEMERDCLIAYGSSMLILERLMISSDAFDVDV
CNQCGLMGYFGWCHYCKSSGSVSSIRIPYACKLLFQELQAMNIAPRLKLDKYFD
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagcgaaaaaagatatgtacgtggatttagagaaattgttgcagccaattaaa
gctgtcgaggaaaaatggaagttggtaccagcatttctcaaaacaaaggggctggtaaaa
caacatattgattcctacaactactttatcaacactgatattaagaagattgtcaaagcc
aatgaaaaagttgtaagccatgcagaccaaacattctacataaagtatttggatatacat
gtgggaaagccagattcaatagaagatatgaatcattctcgattgacaacaccacatgaa
tgcagattgcgagatatgacatactctgcaccagttactgtggacattgaatacaccaga
ggacaacagagaattgtacggaatggaattccaattggaaggatgcctattatgcttagg
agctcaaattgtgcattggctggtatttcacctgctgagatggccaaaaagaatgaatgc
ccttatgactgtgggggctattttattgttcgtgggaatgaaaaagtgattttaattcag
gaacaaatgtcaaaaaatcgcatgattgtcgaagaggacagaaaaggcaatatgtcctgt
caagtcaccagtagcacacacggaacaaagactcgtacaaacgtcgttgtaaacaaaggc
aaatactacttgaaacaaaatagtttccaagatgatataccagtcgccgtagtgtttaaa
gcaatgggcatcgtgtcagaccaagaaatagtacaaatgatcggtacggatgaccgtgtg
atgacatcttttgcaccttccctggaagagtgcgtacgcgcctccattttcactcaacag
caggccttacgacatttgggcaacaaattgcgccaaaaacgtttcttcggagggccaaag
aagacagccacagaagaggctagagaaacacttgccacaactatacttgcccatgttccg
gtggaaaacttcaatttcaaagcgaaagctatgtatctagctttgatgattcgacgggtc
atacaagctgaaaatgatccaagctccgttgatgatcgtgattattatggtaacaagcgt
ttagaattagcgggatcgctactgtcgcttctgttcgaggatttgttcaagcggatgaat
ttcgagttgaaacaaattgctgataagaatattccaaagattaaagcggcccagttcgat
gttatcaaacatattcgaacagatcacatcaccatggggttagaaaatgctatttctacg
ggaaactggactatcaaacgcttccggatggataggcaaggtgtcacgcaaatgctctgt
cgcttgtcgtatatttccggacttggaatgatgactcgcgtcaattctcaatttgaaaaa
acacgcaaggtatcggggccccgctctctacagccttcgcagtggggtatgctttgtccg
tcagacacaccagaaggcgagggatgtggtctcgtaaaaaatttggcactgatgactcac
atcacgaccgaagcagaagaagaaccaatcatccggattgcacagaatatgggggtggaa
gatatcaatctgtttagtggcgaggaaatcagcgacccgaacgtttacacagtctttctt
aatggtaacattctcggactcgttaaaaactaccagcgcctgatccgctactttaaattg
gcgaggcgtcatggctacatcaatgcattcgtttccatttacccgcactttcaaactcgt
tccgtttacatcagttgtgatggtggtcgtttgtgccggccttacataatagtacggaaa
ggaaaaccagccgtaaccgaaaaacatatgcaagagctggcggatagctttcgcacattc
gaagattttatttacgatggattgattgagtacttggatgtcaatgaggaaaatgacagc
aacattgcagtttacgagtccgatatcactgacgagtccacccacctggaaatcgaacca
ttcaccttgctaggcgtctgtgctgggttaatcccatatccccatcacaaccaaagtccc
cgaaacacatatcagtgtgctatgggtaaacaggcgatgggaactattgcttgtaaccaa
cgtaatcggattgatacgcttctttataacttggtttatccacacaaaccaatggtaaag
acgcgaacaattgaactaataaattttgagaaccttcctgccggacaaaacgcaatggta
gcagtcatgagctattctggtttcgatattgaagacgccaccgttttaaataaagcctcc
cttgatagaggttatgggcgctgtctcgtttacaagaacgccaaatgtgctttgaagcga
tacaacaaccagagctctgaccgcgtaaatggtcccatgattgatgcaataacgaaaaaa
cctatttggaaacacgaaattctagacgccgatggctttgcaagcgttggtcaaccggtt
caacctaaacagatattaattaacaaagcaatgccaactgcccctgtggtcgctgttacg
ccaggagcaccagcagccgtccccctgcccgaatatcgtgacgttcccatcacttataag
ggtgcaattccatcatacgtggaaaaagttatgttctcatccaacgctgaagaggcacac
ataatcaaaatccagttacgacaaacccggcgtcctgaaatcggagacaaatttagcagt
cgccatggtcagaaaggagtcactgcgctcattgctgaacaagaagatctaccgtttacg
gaactaggaatttgccccgatgtcattatgaatccccatggatttccatctcgtatgact
gtcggtaagctgatcgaactactagctggaaaagccggtgtgttagagggaaagtttcat
tatggcacagcgttcggagggtccaaggtccaagatgttagtgaggagttgattaaacac
ggattcaactaccaaggcaaagagtgtatgacgtccggcacaacgggcgaacagcttact
gcctatatttatttcgggccggtgtactatcaaaagttgaagcacatggtgatggacaag
atgcacgcacgatcacgtggaccaagagctgttcttacgcgacagccaacagaaggtcga
gcgcgcgatggtggcttacgtctcggtgagatggaaagggactgtctgattgcatatggc
tcaagcatgttgattttggagcggctaatgatatccagtgacgcatttgatgtcgatgtg
tgcaatcaatgtggcctgatggggtattttggatggtgtcattattgcaaatcaagcgga
tcggtttcttccatccgtattccgtatgcgtgcaaactgctattccaagaacttcaggcc
atgaacatagctccacgtcttaaattggataaatattttgactga
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