Daphnia magna (water flea): 116918019
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Entry
116918019 CDS
T07514
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116918019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmk03032
]
116918019
Enzymes [BR:
dmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116918019
DNA replication proteins [BR:
dmk03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
116918019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
HopA1
Motif
Other DBs
NCBI-GeneID:
116918019
NCBI-ProteinID:
XP_032779552
LinkDB
All DBs
Position
LG2:complement(8868224..8874780)
Genome browser
AA seq
1463 aa
AA seq
DB search
MADANDPDHQEKDIGRARRTKQDREGRFAALQKLKDLKGTKNKVTITEVDNVYEEVDERE
YSKRVQRRQEDDWIIDDDGSGYIEDGREVFDDDLGDDNAVQAKSVGRGHKKKDLLKCVPG
RKNNIKNMLIGMPSKNKEKDAKSKDDDILGDIMQELNSTPSSAPPRQTVSTLKRKALTPG
STINRTPTSIPRAGNTLGASRLLKAEPKRLPFAGGASNIDDIIDDCTLIEESNSQCQDYS
CKMDNQMEIDEFDSQPEIKNYDSQSTDATIAKFNIPCEENVEQQELKRISSISEFDLTSG
WETIKNNVDVNQSVAFLDLGSNELPLIEGDDGEQYLRMYWFDAYEDPYVQSGTVYLFGKT
YIESAKTYVSCCVSVKNIEKHIYVLPRETVIDPRTGQDTGVPVNFMDVYEEFNTRVADRY
KIAQFKSRRVLKKYGFEPASIPRESEYLEVKYSAEHNLPTNLKGATFSHIFGANTSALEN
FLLDKRIKGPCWLNVKNPQKANPPVSWCKVEAAVPHIDQIELDVKRDAPPPLAVLSLSLR
TVVNSRSQQVEIVAISCLVQNEFHIDRAAPQPAFQQHFCILSRPTEEPWPLDHRDSLTGA
TVTKIERTESERALLNCFLAKINKIDPDVIVGHDVASYDLDILLHRLAQNKADKWSRLGR
LRRTNIPQSKGVSRSHLAMSGRLVCDVKISAKELIRARSYDLESLCQQVLNLTGIRPDLS
SDAVKKMYSSSASLIGMVAITMQDAANTLRLMYELNVLPLALQITSIAGNLLSRTLLGGR
SERNEYLLLHAFHEKGYIVPDRQAFKKSTKAEDSEPEDGAIEKTSRSKKGRRKPAYAGGL
VLDPKRGFYDKYVLLMDFNSLYPSIIQEFNICFTTVDRQITKASQGEEEVLPDLPDSALP
PGILPTEIRKLVDSRREVKKLINDKLSKDLLLQYDIRQKALKLTANSMYGCLGFSNSRFY
AKPLAALITSKGREILLQTRDLVRKMNLDVIYGDTDSLMIDSNSVDYDQVMKIGIKIKQE
VNKLYKHLELDIDGVFQRLLLLKKKKYAAVTVTQVVRDNKKEMITQQEIKGLDIVRRDWS
QLAIQAGKYALEQILGDLSADERIARIQQKLEDIRDGFRNGTIDLSLLQITKQLTKNPEN
YPDAKNLSHVQVAIRTNSRGGKKLVQGDTVSFIICQDGSNMVATQRAYSMEEMKMPANAH
LKPDIQYYLAQQVHPVVARLCDLLEGIDAVRIAEFLGIDPSGYRSAQNNSNEHDTGSPPV
TDEERFQSCEKFYFQCSEKTCGFEMSMDNVFRKTDDGYVEFALSRCGNSNCKKIPFTAEK
QLVNRLTLAIRKHIQLYYAGWMICEDQSCATRTRRIALKSVRAHPVCIGCGTSNMVVEYN
DFDLYTQLCYYQHMFDASKAINQLKPNERDQVKLAHNNSMDKTYKALLNNINQTLLESAY
SQVNLAGLFYSFNRPKSEASSTY
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgcaaatgatcctgatcaccaagaaaaggatattggccgtgcacgaagaact
aagcaagatcgagaggggaggttcgcagctcttcaaaaactaaaagatttgaaaggaact
aaaaacaaagttacaataactgaagtggataacgtgtatgaagaggtggatgaaagagag
tactccaaaagagttcagagacggcaggaagatgactggattattgatgatgatggaagt
ggatacattgaagatggccgtgaagtgtttgatgatgatttgggtgatgacaatgctgtg
caagccaaaagtgtaggaaggggtcacaagaaaaaagatttattgaaatgtgttcctgga
aggaaaaataacataaaaaatatgcttattggtatgccatccaaaaacaaagagaaagat
gcaaaatcaaaagatgacgatattctgggggatattatgcaagaacttaattcaactcct
tcgagtgcaccgccaagacaaactgtttctacacttaaacggaaagccttaacccctggt
tcaacgataaatcgtactccaacttcaataccaagggcaggaaacactctaggggcatcg
agactcttaaaagccgagccaaaacgtctaccatttgctggaggggcatctaatatagat
gacataattgatgactgcacgttaattgaggaatcaaattcccaatgccaagattattcc
tgtaagatggataaccaaatggagatcgatgagtttgattcacagccagaaatcaaaaac
tatgattcacagtcaaccgacgcgactatagctaaatttaatattccgtgtgaggaaaat
gttgaacaacaagaactgaaacgcatttcgtccattagcgaatttgatctgacatctgga
tgggaaactataaaaaacaacgtggacgtcaatcagagtgttgcttttttggatttgggc
agtaacgagcttcctctgattgaaggcgacgatggagaacagtatttacgaatgtactgg
tttgatgcatatgaagatccttatgttcaatccggcaccgtatacctttttggaaaaact
tatatcgagtcggcaaaaacgtacgtcagttgctgtgtgtcagtgaagaacatcgagaaa
catatttatgtactgccacgcgaaacggttatcgacccgcggactggtcaagacactgga
gttccggtaaattttatggatgtatacgaagaattcaatacgcgggtagcagatcgctat
aaaattgcgcaattcaaatcacgacgagtcctgaagaagtatggcttcgaaccggcatca
attcctcgtgaaagcgagtatcttgaggttaaatattcagcggaacacaatttgcctacc
aatttgaaaggagcaacattcagccacatattcggtgctaacacttctgcgttggaaaac
tttttactggataaacgaattaaaggaccctgttggcttaacgtcaagaaccctcaaaag
gcaaatccacctgttagctggtgcaaagtggaggctgctgttcctcatattgatcaaatc
gagctggatgtcaagagagatgcaccacctcctttggctgtattgtcgctcagtttgcgc
accgtcgtcaatagtcgtagtcagcaagtggaaatagttgccatcagctgtcttgtgcag
aacgaatttcacattgatcgtgctgctcctcaacctgcgtttcagcaacatttttgcatt
ctgagccgcccaaccgaagaaccttggccattagatcatcgcgacagcttgactggagcg
acagtaacaaaaattgaacgaacagagagcgaaagagctttgctaaattgttttttagct
aaaatcaacaaaatcgacccagatgttattgttggtcacgacgtagcttcatatgactta
gatattcttcttcatcgtctcgcccagaacaaggcagacaaatggtctcgtcttggtcga
ttacgtcgtacaaacatacctcagtccaagggagtgagccggagtcatcttgccatgagt
gggcgtcttgtctgtgatgtgaagatttcagccaaggaactgatccgtgcaaggagctac
gatttggagtcgctatgtcaacaggttctaaatttaactggcattcgaccggatctaagc
tccgatgctgtaaagaagatgtactcttcttcagccagtctaattggaatggtagccatt
acgatgcaagacgctgctaacacactaagactaatgtacgagttaaatgtcttaccttta
gctctacagattacttcgattgcaggaaatttgttgtctcgaactctattgggaggtcgt
tcggaacgcaatgagtatcttttgcttcatgcattccatgaaaaaggttatattgtgccg
gatcgacaagcttttaagaaatcgacgaaagcagaagattccgaacctgaagatggtgcc
attgaaaaaacaagtcgtagcaaaaaaggccgtcggaaacccgcctatgcaggcggttta
gttttggatcccaagaggggtttctacgacaagtatgttctgctaatggacttcaattcc
ctgtatcccagcatcatccaggaattcaatatatgctttaccaccgttgaccggcaaata
actaaagcaagccagggtgaagaagaagttcttcctgatttacccgattcagcgttaccc
cccggcattctgccaactgaaattcgaaagctggtggatagtcgtcgagaggtgaaaaag
ctcatcaacgataaattgtcgaaggatctattgctacaatacgacattagacagaaggct
ttaaaattaacagccaacagcatgtacggttgtctggggttttctaattcgcgcttctac
gcaaagcctttggctgcacttatcacatccaaaggaagagaaattcttttgcagactaga
gatctcgtccgcaaaatgaatttggacgtcatttacggagacactgattctttgatgata
gattccaattcagttgattacgaccaagtcatgaaaattggtattaagataaagcaagaa
gtcaataaattgtacaaacaccttgaactcgatattgacggagtgttccagcgcctactt
ttactgaagaaaaaaaaatatgccgcggttacagttacgcaagtagtgcgtgataacaaa
aaagaaatgatcactcaacaagagatcaaaggcctcgatattgttcgacgagactggtcg
caacttgctattcaggctggaaagtatgctcttgaacaaatcttgggtgatttatcggca
gatgaacgtattgcccgaattcaacaaaaactggaagacattcgtgacggcttccgaaat
ggaactatagatctctctttgttacagattacaaaacagctaacgaaaaaccccgaaaac
tatccagatgcaaaaaatctttctcatgttcaagttgccattaggactaactctcgaggt
ggtaagaaacttgtccaaggcgatacagtttcattcattatttgtcaggacggaagtaat
atggtggcaacccagagagcctattccatggaagaaatgaagatgccagcaaatgcgcat
ctgaaacccgacattcaatattatttagctcaacaagtgcatccagttgttgcgcgctta
tgcgaccttttggaaggaattgatgctgtcagaatagctgaatttctcggaatcgatcca
tctggttatcggtccgctcaaaacaacagtaacgaacatgacactgggagccctcccgtg
actgatgaagaacgattccaatcgtgtgaaaagttttatttccaatgttctgaaaagacg
tgtggctttgaaatgtcaatggataatgtttttcgaaaaacggacgacggttacgtcgag
tttgcgttatcccgctgtgggaattcgaattgcaaaaaaataccttttactgcagaaaag
caattagtgaatcgtttgaccctagcgattaggaaacatattcaactgtattatgcggga
tggatgatatgcgaagatcaaagctgcgctacaagaacaagacgcatagctttaaagtcc
gtaagggcacatcccgtttgtataggatgcggaactagtaatatggtagttgagtacaac
gactttgatctgtacacccagctgtgctactaccaacacatgtttgatgcctccaaagcc
attaatcaactaaagcccaacgaaagagatcaagtaaaattggcgcacaacaattccatg
gataaaacgtacaaggccctcttgaataacattaaccaaacccttctagagagcgcgtat
tcgcaggttaatttagccgggcttttttacagcttcaatcgcccgaaaagcgaagcatct
tctacatattaa
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