Daphnia magna (water flea): 116919035
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Entry
116919035 CDS
T07514
Name
(RefSeq) high-affinity choline transporter 1 isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116919035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmk02000
]
116919035
Transporters [BR:
dmk02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
116919035
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Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
116919035
NCBI-ProteinID:
XP_032780795
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Position
LG1:complement(1122101..1125895)
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AA seq
560 aa
AA seq
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MNVNIGGVISVALFYCLILAVGIWVGWKQKRKFERMRVVSGANRSENIMLAGRDMGLFVG
VLTMTATWVAGGYINGTCESAFTGGFLKCSTMAFGYSMSLLLGGMFFAKPMRMAHKGRGY
VTMLDPFQEKYGSRVGGLLFLPALCGEIFWSAAILSALGSIFTVMLGLDNTLSIIISAAV
AVTYTLFGGLYSVAYTDVIQLACVLFGLLFCIPFVWTHPAVDHEAMSQVDWLGTIPLSSV
GSYVDIYLLIILGGIPWQVYFQRVLACRSPQQAQYLSYIAAFGCLILAVPPAILGSVARV
TDWKNGTEYGQDITTPEEIKSILPLILQYLTPKWVSFIGLGAVSAAIMSSADSTVLSTSS
MFVHNIYKTVFFPKSSEHHLVHVMWVSIVVSAGLGTVMAITVNTIYGLTYLCADVVYVVL
FPQLLLVIYAGDYTNTYGCITAFVTGFTLRVLSGEQLLNLPAVLKFPFYDEETLEQRFPF
RTFLMLASIVLQLIVSAVAKNVFVQGYLSPKYDVFKCFDSNSSIIVAIDSKLNSGDAKDI
DEETFFLNDSQPIPLRQSSK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttaatataggcggtgtaatttcggtggccctgttttactgtttgatccttgct
gtcggcatctgggtcggatggaagcaaaagaggaagttcgagcgaatgcgggtcgtaagc
ggcgccaaccggtccgagaacattatgctagctggacgtgacatgggattatttgtcgga
gttttgactatgacggccacatgggtggcgggaggttacatcaacggaacttgcgaaagc
gctttcaccggtggctttctcaagtgttccacaatggcttttggatattccatgagtctt
ttacttggtggaatgtttttcgccaaaccgatgcgcatggctcataaaggtcgaggatac
gttaccatgctcgatccgttccaggagaaatacggatcccgtgttggtggactattgttt
ttgcctgccttgtgtggagagatattctggtccgccgctatcctctcagctctaggatcc
attttcaccgttatgttgggactggacaatactctttcgataattatcagcgcagctgta
gctgttacctacacactgtttggtggcctttacagcgttgcctatacggatgtcattcag
ctcgcctgtgtcctctttggcctgctattctgcattccatttgtttggactcatccagct
gttgaccacgaggctatgagccaagtggactggttgggcaccattccactgtcttctgtt
ggtagctacgtcgatatttatttgctcatcatccttggtggcatcccttggcaagtgtac
tttcagcgggtgttagcatgtcgttctcctcaacaggcgcagtacctgtcctacattgca
gcctttggctgccttatcctggccgtcccaccggccattctgggttccgttgctcgtgtt
actgattggaaaaacgggacggagtatggccaagacatcacgacacccgaagaaatcaaa
tcgattctaccgttgattcttcaatacctgacgccaaagtgggtatcgtttatcggtctc
ggcgccgtgtcggcagccattatgtcgtcagcagattcgaccgtgttgtccactagctcc
atgtttgttcataacatctacaaaactgtattttttcccaaatcttccgagcatcattta
gtccacgttatgtgggtttcaatcgtcgtatcagcaggtcttggcactgtaatggctatt
acagtcaacactatctatgggctgacatatctgtgcgccgatgtggtctacgtggttcta
ttccctcaactcctccttgtcatttacgcaggagactataccaacacttacggatgcata
actgctttcgtaacaggctttaccctcagggttttaagcggcgagcaacttctaaatctt
ccagcagtcttaaaatttccattctacgacgaagaaactctggaacaacgatttcctttc
cgcacgtttttaatgcttgcatcaattgtgctgcagttgattgtgtcagctgtcgccaaa
aatgtcttcgttcagggctatttgtctccaaagtatgatgtcttcaagtgctttgatagc
aatagttcaatcatcgttgcgattgacagtaaattaaattcgggtgatgctaaggatatt
gatgaggagacgttctttttgaacgattcccaacccattcctctacgccaaagctcaaaa
tga
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