Daphnia magna (water flea): 116924530 Help Entry 116924530         CDS       T07514                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism dmk  Daphnia magna (water flea) Pathway dmk03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:dmk00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     116924530  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dmk03019]     116924530 Enzymes [BR:dmk01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      116924530 Messenger RNA biogenesis [BR:dmk03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      116924530 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N CbiA ATP_bind_1 TniB AAA_22 MMR_HSR1 AAA_10 AAA_16 nSTAND3 Motif Other DBs NCBI-GeneID:  116924530 NCBI-ProteinID:  XP_032786947 LinkDB All DBs Position LG6:7590046..7592550 Genome browser AA seq 427 aa AA seqDB search MSEEQRQKESEVVQEFKLDPDNELRFEVESKEKATLELKSGLAEVFGTEIVKGKVYTFGG GSKIAVFTWQGCLLELRGKTEAAYVARETPMIIYLNTHAGLEQIRKKADSDETKRGPIAM VVGPTDVGKSTVCKLLLNYAVRMGRRPIYVDLDVGQGQLSIPGTIGAMAIERPADVEEGF SQVCPLIYHYGYKEPGSNVMLYNLLVTKLAQTVAERMEANRQNAVSGVIINTCGWIKGQG YQMLIHAAKAFEVDLIIVLDQERLYNELVRDLPETVKVVFQPKSGGVVERSRQARIEARD QRIREYFYGSAAQFYPHSFEVRFSDVKIFKIGAPALPDSLMPLGMKAEDQLTKLVTVQPS QQLLHHLISISMAESGDDDIIQTNVTGFICVNNVDLERQMLTVLSPQPRPLPRTRLLISD IQYMDSH NT seq 1284 nt NT seq  +upstreamnt  +downstreamnt atgtcggaagagcaacgacaaaaagaatccgaagtggtacaagaattcaagctagaccca gataatgaacttcgttttgaagttgaaagcaaagagaaagccaccctggaattaaaatct ggattggcggaagtatttggaacagaaattgttaaaggaaaagtgtacacttttggtggt ggctcaaaaattgctgtgttcacatggcaaggttgtcttttagaattaagaggaaaaaca gaagctgcatatgttgccagagaaacacctatgatcatttatcttaatacccatgctggc ctggaacagatacggaaaaaggctgattctgatgagaccaaaagagggccaattgcaatg gttgttggtccaacagatgttggaaaatcaactgtttgtaaattgctactgaactatgct gtaagaatgggtagaaggcccatatatgttgatttagatgttggccagggccaactttcc attcctggcactattggtgctatggcaatcgagcgtcctgcagatgttgaagaaggattt tctcaggtctgcccactgatataccactatggctacaaagaacctggaagtaatgtgatg ctgtacaatttacttgtcacgaagttagcccaaacagtggcagaaagaatggaagcgaac cgacagaatgctgttagtggtgtgattatcaatacttgtggttggatcaaagggcagggc tatcaaatgcttattcacgctgcaaaagcatttgaagttgatctaataattgttcttgac caagaacggctttacaacgaactagtgcgagacttacctgaaactgtgaaagttgtattc caaccgaagagtggcggagtcgttgaaagaagtcgacaagctagaatagaggcccgagat cagagaatacgtgaatatttctatggttcagcagcccagttttacccacactcgtttgaa gtcagattttccgatgtaaaaatattcaaaattggggctccagccttgccagattcgtta atgccactaggaatgaaagcggaagatcaacttacgaaactggtcaccgtacaaccaagt caacagttgctgcatcacttgatatcaattagtatggctgaatctggagacgatgacatc atacaaacaaacgtcactggatttatttgcgtgaacaacgtcgacttggaacggcagatg ctcacagttttgtcacctcagccccgaccattacctcgaacccgattgctcatatctgac atccaatatatggactcccactaa

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