KEGG   Daphnia magna (water flea): 116930018
Entry
116930018         CDS       T07514                                 
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116930018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dmk03041]
    116930018
Spliceosome [BR:dmk03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116930018
 Complex B
    116930018
 Complex C
   U2 SnRNP specific factors
    116930018
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Cir_Bir_Yir
Other DBs
NCBI-GeneID: 116930018
NCBI-ProteinID: XP_032793255
LinkDB
Position
LG1:3713134..3715428
AA seq 506 aa
METLLEQQRRYHEEKERIVDSMVKETIFKKTTQREIINSEHRQKILLDRYLESTRVLKEI
YEDKDGQRKEEVALLSGPNEFVEFYNRLKQIKEFYKKHPNEIAVPMSMEFDDFAKQRESG
ADETNNLVDFTDEEGYGKYLDLHESYVKYINLKGIPKVDYINYLNIFDRLFDIPREKKNG
EYRYYLQSLVDYLVDYVARVKPVMDLDNLFREIEQDFEKDYTAGTFPGWPKETTGSALAN
TGAPLDVSAFSSWEELASLGLDRLKSALMALGLKCGGTLEDRAKRLFGTKGLQIDEIDKS
LFAKGQGKNRGASDQDKEAEKHKKIALLEAQVYKLVEILSEPRHATKENVERKQARTDGE
REEEEEDVIEVPEDEDEDDDVPYNPKNLPLGWDGKPIPYWLYKLHGLNISYNCEICGNYT
YKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTRIEDAISLWTKLRSQKTSERFVADH
EEEYEDSMGNVIPKKTYEDLRRQGLL
NT seq 1521 nt   +upstreamnt  +downstreamnt
atggagactttgctggagcagcagaggaggtaccatgaagaaaaagagcgtatcgttgac
tctatggttaaggaaacaatctttaaaaaaaccacgcaaagggagataatcaattcagag
cacaggcaaaagatcttgcttgacaggtatttggaaagcacaagagttttgaaagaaatc
tatgaagacaaggatggccagcgaaaagaagaggtcgccctcctctctggtcccaatgag
tttgtagagttctataacagactaaagcagatcaaagaattctacaaaaagcatcctaac
gagatcgcagtacctatgtcaatggaatttgatgattttgcaaaacaacgggaaagtgga
gctgatgaaacaaacaatttggtagatttcactgatgaagaaggttacggcaaatatcta
gatcttcacgaaagctatgtgaaatacatcaacttgaaaggaattccaaaagtggattat
atcaattaccttaacatttttgaccgtctgtttgatattcctcgagagaaaaagaatggc
gaataccgctattatctccaaagcttagtagattatctggtcgattacgttgcacgggtg
aaaccagtcatggaccttgacaatcttttccgcgaaatcgaacaagatttcgaaaaagac
tatacagcggggacattccccggatggccgaaagagacaacaggaagcgctttggcaaat
acaggtgctccgcttgatgtatcggcattttcatcttgggaagaattggcatcactaggc
ctggaccgcttgaaatctgccttgatggctttgggtctcaagtgtggcggcacactcgaa
gaccgtgccaagagacttttcggtacaaaaggcctccagatcgacgaaattgataaatcc
ctctttgcaaaaggccagggtaaaaatcgaggggcaagcgaccaggacaaagaagccgaa
aaacacaagaaaatagcacttttagaagctcaagtttacaaactcgtcgaaatcctgtcc
gaaccacgacatgccaccaaagagaatgttgaacgaaaacaggcccggacagatggtgaa
cgagaagaagaggaagaggacgttatcgaggtccctgaagatgaagatgaagacgatgac
gtaccgtacaatcccaagaatttgccgctaggttgggacggaaagccaattccgtattgg
ttgtacaaattgcatggcttaaatattagctacaactgcgagatttgcggcaactacaca
tacaagggcccaaaggcgttccagcgtcactttgctgaatggcgtcacgcccacggcatg
cgatgcttgggtattcccaacacagcgcactttgccaatgtaacaaggatcgaagacgcc
atttcactttggacaaagctgaggagtcaaaagacatcagaacgtttcgtcgccgatcac
gaagaagagtacgaagactctatgggcaacgtcatccctaagaaaacgtacgaagatttg
cgtcgacagggtcttttgtaa

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