Daphnia magna (water flea): 116933271
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Entry
116933271 CDS
T07514
Name
(RefSeq) high-affinity choline transporter 1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
dmk
Daphnia magna (water flea)
Pathway
dmk04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dmk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116933271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmk02000
]
116933271
Transporters [BR:
dmk02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
116933271
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Gene cluster
GFIT
Motif
Pfam:
SSF
DUF6338
Motif
Other DBs
NCBI-GeneID:
116933271
NCBI-ProteinID:
XP_045035913
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Position
LG10:9135328..9138485
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AA seq
575 aa
AA seq
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MIINTAGIAAVAVFYLVILFVGMLAAWKQRKAGRGTSSPEENIMLAKRDLGLFVGVLTMT
ATWVGGGYVNGSAEAVFSNGIVWCQTPFGYSLALILGGLFFAKPMREKGYITMLDPFQIK
YGLNIGGLLFLPALFGETIWTASILSALGSTLSVILEMDNNLAVFSSAAVAVIYTFFGGM
YSVALTDVIQLFFILFGLVLCIPFAWMHPAVNQEALVNQNWLGHVEPSSSGIFIDNYLLL
IFGGIPYQAYFQRVLSVKSSKQAQWLSYMAAILCTLLSIPSILLGGIAKNTDWLNGTDYA
MALTSPDQVKQVLPLVLNYLTPQWVSFFGLGAVSAAVMSSADSCILSASSMFTHNIYKAI
VCPSASGPHLMIALRVSILAVAAIASVLAVSINSIYGLSLLCSDMVYVLLFPQLLLVIHA
ESSCNKYGCITSFLFGIILRILSGEELLGLPVVIQFPFYNDGRQQMPFRTLIMVFTLFVH
LGVSFVTEQCFTKGWLPQKFDFLNSYPLEMTYQQEDISPEELHFQFMTNGKLEATVQEVE
LTEMGPKFDSVLSISHPKVKSSSIPIQTSKIHLNN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaacaccgccggcatagcggctgtggctgttttttatttggttattcttttc
gtcgggatgctggctgcctggaaacaacgcaaagccggacgaggaaccagcagcccagaa
gaaaacatcatgctggctaaacgagatttaggactctttgtgggagtccttacaatgaca
gctacgtgggttggaggcggatacgtaaacggatcggcggaagctgttttcagtaatgga
atcgtttggtgtcagactccgttcggttactcgcttgccttgattctcggcggactcttt
tttgctaaacccatgagagaaaaaggttacatcaccatgctcgatccgttccagatcaaa
tacggacttaacatcggtggattgctttttctgcctgcacttttcggtgaaacaatttgg
acggcatcaattctctctgctttgggatcgaccttgtctgttattctggaaatggacaac
aacttggctgtgttttccagcgcggccgtggccgtcatctacacattttttggtgggatg
tacagcgtagcgctaactgatgtcattcagctcttcttcatcctgttcggattggtttta
tgcattccatttgcttggatgcatccggctgtaaatcaagaagcgctggtcaaccaaaat
tggctgggccacgtagagccatcaagttcaggaatatttattgataactatctgctgctt
atctttggcggaattccctaccaggcttatttccagcgagttttatccgtaaaatcgtcg
aaacaagctcaatggctctcgtatatggccgctattctttgcacattattgtcaattcca
tcaatactgctgggaggtatagccaaaaacacagattggcttaacggtacagattacgca
atggccttaacatcgcccgatcaggttaaacaggtcctaccgctggttcttaattactta
acaccacagtgggtttccttcttcggtctgggtgccgtctctgccgccgttatgtcatcg
gctgattcttgcatcctctcggcctcgtcaatgtttacgcacaacatctacaaggccatc
gtctgcccatctgctagcggacctcatttgatgatcgcgttgcgtgtgtccatcctggca
gttgcagccatcgcatccgtactggcagtcagcatcaacagcatttacggcctttcgttg
ctttgctcagacatggtttacgttttactgttccctcaattgctgctggtcattcacgcc
gagtctagttgcaacaaatacggatgcatcacgtcattcctgtttggcattatcctgcga
attctcagtggcgaagagttgctaggattaccggtcgtcattcagtttccattctacaac
gacggacgccaacagatgcctttccgcacgctcatcatggtgttcacgctcttcgttcat
ctgggagtctctttcgtgacggagcaatgctttactaaaggatggctgccccaaaaattc
gactttctcaacagctatccgttggagatgacgtatcaacaggaagatatttcaccggaa
gaattacatttccaattcatgaccaacgggaaactggaggcgacagtgcaggaggtggaa
ctgacagaaatgggccccaagtttgattccgttttaagcatatcacatcccaaagtaaag
tcgtcgtcgattccaattcaaacttcgaagattcatctaaataactaa
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