KEGG   Daphnia magna (water flea): 123466524
Entry
123466524         CDS       T07514                                 
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1-like
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
dmk  Daphnia magna (water flea)
Pathway
dmk04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:dmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123466524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dmk03009]
    123466524
Ribosome biogenesis [BR:dmk03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    123466524
SSDB
Motif
Pfam: UFD1_N1 UFD1_N2 CDC48_2
Other DBs
NCBI-GeneID: 123466524
NCBI-ProteinID: XP_045031640
LinkDB
Position
LG6:3410730..3412382
AA seq 301 aa
MFGFGFLEMPRPFNTQYRCYSVSMLPGQERQDVEKGGKIIMPPSALDQLTRLNIVYPMLF
KLTNPREGRITHCGVLEFVADEGKIYLPYWMMQNLLLDEGDLLNIESASLPVATFSKFQP
QSEDFLDISNPKAVLENALRNFACLTSGDVVAITYNEKVYELRVLETKPGKAVSIIECDM
NVEFAPPVGYSEPKKIVKKNQEEHMDTIEPITYEPEDQGFIAFAGQGIRLDGKVRKVKDD
EPPVIKASYKRGVPDYDYHFGNLKFIRAPKKDDDKKKESAETSTFEAFSGAGKSLRQTKA
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtttgggtttggttttctggaaatgcctcggccatttaatacccaatacaggtgttat
tcagtctccatgttgcctggtcaagaacgtcaagatgttgaaaaaggaggaaaaattata
atgccaccctctgccctggatcagttgacaaggcttaatattgtgtacccaatgttgttt
aaattgacaaaccctagagagggacgtattactcattgtggagtattagaatttgttgca
gatgaaggtaaaatatacctaccttactggatgatgcagaaccttcttttagatgaaggt
gatttgcttaacattgaaagtgcatcattacctgttgcaaccttctccaagtttcaacca
cagtctgaagactttttggatatcagcaatcccaaagctgttttagaaaatgctttgcga
aactttgcatgccttactagtggggatgttgttgccattacttacaatgaaaaggtttat
gagctacgggtcctcgagactaagccgggaaaagctgtttcaatcatcgaatgtgatatg
aatgtagagttcgctccgcctgtgggatactctgaacctaaaaaaattgtgaaaaaaaat
caagaagaacacatggatacaattgaaccaataacttacgagccagaagatcaaggattt
atagcctttgctggacaaggaatcaggttggacggaaaagtaagaaaagtcaaagacgat
gagccccctgtcattaaagctagttataaacgaggagtacctgactatgattaccatttc
ggtaacctcaagtttattcgagccccaaagaaagatgatgacaaaaagaaggaatctgct
gaaacttctacctttgaagctttctcaggtgctggaaaatctttgcgccaaacgaaagca
gtttaa

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