Desulfococcus multivorans: Dmul_10240
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Entry
Dmul_10240 CDS
T04568
Name
(GenBank) RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dml
Desulfococcus multivorans
Brite
KEGG Orthology (KO) [BR:
dml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dml03016
]
Dmul_10240
Enzymes [BR:
dml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Dmul_10240
Transfer RNA biogenesis [BR:
dml03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Dmul_10240
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AOY57799
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All DBs
Position
complement(1151257..1151835)
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AA seq
192 aa
AA seq
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MSGMDRIRAFIAFKIPESVLCHIRSIQETLAAGGISMRWTPVENVHLTLKFLGDIRPTAV
ESIFEAMTGSVQAAFPLRFSAKGLGVFPGIHRPRVLWIGLKGDTALLIDLQRRLDVALEA
LGFAPELRSFKAHLTIGRARGPLNPQKLALLLASAGSAESPQFSVDKLILFQSELYPRGP
IYTELKTAVLAG
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatggatcgtattagagcctttatcgcgtttaaaattccggaaagcgtcttg
tgtcatatccggagcatccaggagacgcttgcagccggagggatctccatgcgatggact
cccgtcgaaaacgttcatctgacattgaagtttctgggcgacatccgaccgacggctgtg
gaatcgatttttgaagcgatgacgggttcggtccaagccgcattccccctccgattcagc
gccaaggggctcggtgtctttcccggcatccatcggccgcgagtgctctggatcggcctt
aaaggagataccgcccttctcatcgatcttcagcgccgactggatgtggccctcgaagcg
ctggggtttgccccggaactcagatcgttcaaggcacatctcaccatcggtagagctcgc
ggaccgctgaacccccagaagcttgcattgcttttggcctcggcaggttccgccgaatcc
ccccaattttcggtggacaaattgattttgtttcaaagcgagctttatcccagaggaccg
atctatacggaattgaaaacggccgtcctggcgggttga
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