Desulfococcus multivorans: Dmul_24300
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Entry
Dmul_24300 CDS
T04568
Symbol
recJ
Name
(GenBank) RecJ: single.stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dml
Desulfococcus multivorans
Pathway
dml03410
Base excision repair
dml03430
Mismatch repair
dml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dmul_24300 (recJ)
03430 Mismatch repair
Dmul_24300 (recJ)
03440 Homologous recombination
Dmul_24300 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dml03400
]
Dmul_24300 (recJ)
DNA repair and recombination proteins [BR:
dml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Dmul_24300 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Dmul_24300 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Dmul_24300 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Sugar-bind
Toprim
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AOY59202
LinkDB
All DBs
Position
2723643..2725352
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AA seq
569 aa
AA seq
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MKTEWLLKHPDPIAVKALQTDLGCSPVIAAVLVNRNILTGCEAVNFLEASLKDFHPPSCI
VDMDTAVRRIARAVSNREKILIFGDYDVDGVTAVTLLLEFLRYAGADVIYYIPHRTREGY
DFQEDHVFGVALPAEVDLIVTVDCGSSRHDAVQAALDSGIDVVITDHHTIEALPPAVAVV
NPRRRDCGGGCDHLAGVGVVFSLLIHLRKHLRDIDFWGCRPEPNLKRFCDLVALGTVADM
VPMIKENRILSRTGLDVINQGHRSGLRALVRMSGIKDRPVDTDDIAFRLGPRLNAAGRMG
HAGLAVELLTAGSDETADQMALQLNRMNKKRQEAEKEILDQVTAYIEKHPHILDRRSIVM
AHSNWHEGILGIVASKLVDRFFRPVVLISTRTSIGKGSGRSIPGINLHACLKQCAAHLKA
FGGHPMAAGLRIQRENIRRFEDKFDRVVSETGHVDNFSRSLAIDCKLDFEDITGTLLNEL
ERLTPFGEGNPEPLFMTSDVRVVAHRIVGKQHRKMTLIQAGNPVGTVVEAIQFNIDPSER
PESFEKIAYHLRWNRWNGKQTPQILVKES
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggaatggttactcaaacaccccgaccctatagcggtcaaggcgctgcagacg
gacctcggttgcagcccggtcatcgccgccgttctcgtcaaccggaacattctgaccgga
tgtgaggccgtgaactttcttgaggcctcgttgaaggacttccacccgccgtcctgcatc
gtggatatggacacagcggtccggcgcatcgcccgagccgtttccaacagggaaaagatt
ctgattttcggggactacgatgtggacggcgtgacggcagttacactgcttctggaattt
ctgagatacgccggagcggatgtcatttattacattccccatcgaacccgtgaaggatat
gattttcaagaggatcatgtcttcggcgtcgctctgccggcggaggtggacctcatcgtc
accgtggactgcggatcgagccgccatgacgcagttcaggccgcactcgacagcggcatc
gatgtcgtcattaccgaccatcacaccatagaggcgctgccccccgcggttgcggtggtc
aaccccaggcggcgggactgcggcggcggatgcgatcaccttgccggcgtcggcgtggtc
ttttcccttttgatccacttgcgcaaacacctccgggatatcgatttctggggctgccga
ccagaacccaatctgaagcgattctgcgatctcgtggccctcggaacggtagcggatatg
gtcccgatgataaaagagaacagaatcttgtccagaaccggacttgatgtgatcaatcaa
gggcatcgatcgggccttcgcgccctcgtcaggatgtcgggcatcaaggatcgtccggtc
gacacggatgacatcgctttccgccttggccccaggctcaacgccgccggccgaatggga
catgccggtctggcggttgagctgctcaccgccggaagcgacgagacggcagaccagatg
gccctgcagctcaatcgaatgaacaagaagagacaggaggcggaaaaggaaattctcgac
caggtgacggcatacatcgaaaaacacccccacatcctcgatcggcgcagcattgtgatg
gcccattccaactggcacgagggcattctaggtatcgtcgcatccaaattggtggaccgc
tttttcaggccggtcgtcctcatctccacgcgcacttccataggaaaaggatccggaaga
agcatccccggcatcaacctccacgcctgtctgaagcagtgcgccgcccacctcaaggct
ttcggtggtcaccccatggcggcgggactccggatccagcgggaaaacatcagacgattc
gaggataagttcgaccgcgtcgtttcggaaaccggccatgtcgacaacttttcacgatcc
ctcgccattgactgcaaactcgattttgaagacatcaccggcacccttctcaatgaactc
gaaaggctgaccccttttggagaaggcaaccccgaaccactcttcatgacgtcggacgtt
cgtgtggtcgctcacaggatcgtgggaaaacagcaccgtaaaatgaccctgatccaggcc
gggaatcccgtcggaaccgtcgtggaggccatccagttcaatatagatccgtccgagcgt
ccggaatcctttgaaaagatcgcctatcatctgcgatggaaccggtggaacggaaaacaa
acacctcagattctggtcaaggaaagctga
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