Drosophila miranda: 108159708
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Entry
108159708 CDS
T06132
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108159708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
108159708
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
108159708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_16
TPR_8
TPR_19
TPR_14
TPR_11
TPR_CcmH_CycH
TPR_17
TPR_9
ANAPC3
ARM_TT21_C
ChAPs
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
108159708
NCBI-ProteinID:
XP_017148711
LinkDB
All DBs
Position
3:complement(17802665..17807189)
Genome browser
AA seq
1231 aa
AA seq
DB search
MSSKESKPLIKDIRETIKLGKHADAIHKCKRLLNADPSNAMGYLLLGAAYQSLDKTEAAK
SLRKSIEYTKGPATVALQGLSKCAPIAELPEIYDELVDLLPEKALDYWEKLFTLASDETV
APLCFKVFKKRAQNPKDSHYAKIQEYLGRIWFAQDIEVSAEDNVLYNKTMEALLDISEPS
VKSVVYKRFLKWLYKQKDYVACVRHACNMTVSHPKDVYGYEWICKTYCENHNQLNTAAWQ
QELKQPIQAYADQLLELNPSSNLALLIKAFDLFAQGQYVPARQFAVQAQQSQPNYKVTLE
LLARIHMEFGAYKLALQLWQKLGQQNEASGRCLSYEKNESNLREAVKVLLRHDKSEPNVR
ALARCYIKLGEVQLLKDLPLDALSKAEFLLSPAEAIRAIAKDESFEALLLCGKLQMLQKN
YAEALSCMLKAARMRPHVAECFDYLGRLYPLATGDMARARKCYEKCISLNALAEEAVDAL
SFIYQQLGEEDLNETLLMNTLRYLSNDDSIRLQYKLGLHFLQVRKWDNAIQCFRIAIKHD
FRCMVYWESLGDAYAARGSYNSAFRVFQKILELSPVNSYALLQIAVIKTTIRMYSEAIED
FDALLKLNPNYLPGLRGAAEAHIGIANNLKSQNLYGRAKQHFQSAVGLLESAFTQAEAQG
MVWLWRLTASVFLQTAQLPGSLANLDVVGSLAKRDEAVAYLSRKDLLKLAQRFYLCALKL
KQNTYLWYELALASYCSAIYIPEEATSHLETAAKVCKRAIKERSNRWQNWNLLGVINMHA
DHENLPLAQHCFIQALNLDRKSFTTWTNLGVLYIKANDIRLANEAFKRAQQSSLIYANAW
IGQAMVAELIGDEEEAFDLFRHCQQFDYHPEAALGFAYWVCEVLSDPVARAKPHNRYAIA
HMYADVYALDAINWYVQNEESEASIASLTFQGFLCARKKLYHQAIKAFTRASQLCEPGAE
RDTLYTNLGYLYLKLDQPHQAVNALNTVSHATFKPIVGLALAYYRSGQLQESYSIYNSVL
NNVAGQNDDKAATILVAMASMIYAFQGEADTKTLLYQCVLTKNAPIQALYSSCALAILHR
DNELNRTVMSELRAYDFSEKYCVDISYLTANYFLINEGPLDALRYLQKRVRMFPRSAGLR
KVLLKFLLDYFAGDQSYRLATSNVALGALTLGHSSLRNGTKASEEAETTIYASRAVIHVD
KACSLKLIQRAIRLNPTNQQARQLLATVSAH
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaaagaatccaagccgctaatcaaagatattcgggagacaatcaagcttggg
aagcatgcggacgccattcacaagtgcaagcgcctgctgaatgccgacccgagcaatgcg
atgggatacttgttgcttggtgccgcctatcagagcttggacaagacagaggcggcaaag
agcctgcgaaagtcgattgagtacacaaaaggccccgctaccgttgccctgcagggactc
tctaaatgcgcgcccatcgccgagctgccagaaatctatgatgagcttgtggatctgcta
cctgaaaaagccctagactactgggagaagctattcaccctggcctcggatgaaactgtg
gctcccctgtgctttaaagtgttcaaaaagcgggctcagaatcctaaagattcccattat
gccaaaatccaagaatatctggggcgcatttggtttgctcaggatattgaggtatcggca
gaagataatgtactttacaataaaacgatggaagcactactggatatctcggagccaagt
gtgaaaagtgtggtgtacaaacgattccttaaatggctatacaagcaaaaggactatgtg
gcctgtgtgcgccatgcctgcaacatgaccgtctcccatcccaaggatgtctatgggtac
gaatggatatgcaagacatactgcgaaaaccacaatcagctaaacactgctgcctggcag
caggagctgaagcagccaatccaagcatatgccgatcaattactggagctgaaccccagc
tctaacttggccctactgattaaggcattcgatctctttgcccagggccaatatgttccg
gccaggcaatttgctgtgcaggcccaacagagccagcctaactacaaggtgacgctggag
ctcctggcccgaatccatatggaattcggggcgtacaaactggctctacaactctggcag
aagctaggccaacaaaatgaagcgtctggccggtgtctctcttatgaaaagaatgaatcc
aatttgagagaagccgtcaaagtgctgctgcgccatgataaatcagagcccaatgttcga
gccttagctcgctgctacatcaagttgggggaggttcagctgctcaaagatcttccattg
gatgcactttccaaggcggaatttctcttatcaccagctgaagccattcgggctatcgcc
aaagacgagtcttttgaggcgctgcttctatgtggcaagcttcagatgttgcagaaaaac
tatgcagaggccctgagctgcatgctaaaggccgctcggatgcgaccgcatgttgccgag
tgcttcgactacttgggtcgcttgtatccactggccactggcgatatggcccgcgcccgc
aaatgctatgagaagtgcatcagcctcaatgccctggcggaggaggctgtggatgccttg
agctttatttaccagcagctgggcgaggaagatctaaatgagacgctcctgatgaacacc
cttcggtacttgagtaatgatgactcgatccgcttgcaatacaagctgggcctgcacttt
ctgcaagtgaggaaatgggataatgccatccaatgctttcggattgccatcaagcacgac
tttcggtgcatggtctattgggaatcactgggcgatgcttatgcggctcgaggctcttac
aactcggcttttcgtgtctttcagaaaatcctcgagctgtccccagtcaacagctatgct
ctcctccagatagccgtgatcaagacgacgattcgcatgtactccgaggcgattgaagat
ttcgatgcgctgctcaagctgaatccaaactacttgcctggtttgcgaggcgccgcagag
gcgcacatcggtatagccaacaatctgaagtcccaaaatctttacggccgtgccaaacag
catttccaatcggctgtcggacttctggaaagtgcattcacccaggcagaggcgcagggt
atggtttggctgtggcgcctcacggctagtgtatttttgcagacggcccagctgccgggc
tccctggcaaatttggacgtggttggcagcttggccaagcgcgatgaagcggttgcttat
ctatcacgtaaagatctgctgaaactggcccagcgcttctatctatgcgccttgaaattg
aagcagaacacatatctgtggtacgagttggccctggccagctactgcagtgctatttac
attcccgaagaagcaacaagccacctggaaacggctgccaaggtatgcaagagggcgatc
aaggagcgtagcaatcgctggcagaactggaacctcctcggcgtcatcaatatgcatgcg
gatcacgagaacttgcctctggcgcagcactgcttcatccaggcgctgaatctggatcgc
aaatccttcacgacatggaccaacctaggcgtgttgtatatcaaagcgaatgacattcga
ctggccaatgaggccttcaagcgcgcccagcaatcgagtctgatatatgccaatgcctgg
ataggacaggcaatggtagcggaacttattggcgacgaagaagaggccttcgatctgttc
cgccattgccagcagtttgattatcatccggaggcggctctcggattcgcttactgggta
tgtgaggtgctctccgatcctgttgcccgggccaagccccacaacagatatgcgattgcg
cacatgtatgcggatgtctacgcattggatgccattaactggtatgtccaaaatgaagag
tcggaggccagtatagcgtcactcacgttccagggattcttgtgcgcccgcaaaaagctt
taccaccaggccatcaaggcttttacgcgcgccagccagttgtgcgagcctggagccgaa
cgagacacactgtatacgaacctgggatacttgtacctaaagctggaccagccccatcag
gcagtcaacgctttgaatacagtgtcccatgccacgttcaaacccatcgttggcttggcc
ctggcatattaccgatccggtcagctgcaggaatcgtattcgatatacaattccgtatta
aacaacgtggcgggacaaaatgatgacaaggcggctaccatattagtggccatggcctcg
atgatttatgccttccaaggcgaagcggacaccaaaactcttctctatcagtgtgtcctg
acgaagaatgcgcccatccaggccctgtactcttcttgtgctttggccattctgcatcgc
gataacgaactaaaccggaccgtaatgtcggagctcagggcgtacgattttagcgagaag
tactgcgtcgatatatcctacctaaccgctaattatttcctgataaatgagggtccccta
gatgctctccgttatttgcagaagcgcgttcgcatgtttccccgctctgcgggacttcgc
aaggtgttgctcaagtttcttcttgattatttcgccggagatcagtcttaccgactggct
acctcgaatgtggccttgggagctctaacgcttggtcacagcagccttcgaaatggaaca
aaggccagtgaggaggcggaaacgacaatctatgccagtcgggctgtaattcatgtcgac
aaggcctgttccttgaagcttatccagcgcgccataagactgaatccaactaatcagcaa
gccagacagttgctagccaccgtttctgcccattaa
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