Drosophila miranda: 117193348
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Entry
117193348 CDS
T06132
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dmn
Drosophila miranda
Pathway
dmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117193348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmn03019
]
117193348
Messenger RNA biogenesis [BR:
dmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117193348
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117193348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_1st
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
Motif
Other DBs
NCBI-GeneID:
117193348
NCBI-ProteinID:
XP_033253961
LinkDB
All DBs
Position
Y
Genome browser
AA seq
2548 aa
AA seq
DB search
MNVENLKTPPTQLRNLVKHVNKRNFNETSEQINQFIKDHGLEADRSSLRYLFTAINFSDP
SPTVTVQLQAKLLGGQLQRQLQSSSFVSNICFAFDQHFANSQKSLKPSETAELIGQVCRL
TGLNKLCECVFALAVTHSTHPELRESARDCLRGSITELLDSYLGNNNSSSATSGLQDISI
DLLQYLLCCLKKYVTPKRHEQFLIKLREEFPRQAVPLILAPFLYGSTTVATSNTVGANAS
ETDAEAEATTTTETETASSSISPSTSSNSCGTDALNEVGIEDIYDNLSEIIFTNQGKNNI
MDTSWINLILEIGYEFTSSVEECKNHLCSRERERTELQPKDVAKIVGLMCRRHSSLLDCN
VNLPTPANFWPRQGQGGGSNSSGGSSQAQATPAQQGQNSSSNSNNNDGASDGGGSSSSDK
KDKKETTDATQTWKPDVFVQALKELVPQLNWKDVCIELDHSEFVLKDRIGLDLLLTILRL
ATQSNIFPHPECIYRHWANTEGQLSLISTLLKNPDLFSFADFVFSQPTLDVLKTAPDADN
KEISAWKSLHLVEVLLSLADKGYYTQVHELFKFPAQNCPDVLFLALLHINPPLTPLRQDL
FKLLIPTFLNNHPNSNVILASAWSSTNFSLRPTIMNAMSEWYLRSSDFDQVKLSRILDLA
QDLKALSSLLNARSFLFIIDLACLASRREYLKLEKWLTDKIRDHGEPFMQAMIKVLLRRC
PQVANAKVPEEQLPPKQAQLLPETVTTMINCLQTCINSCMQPEMVEMIMQMTANVAIMAN
KARAQQQQQQQQQQPGLVPPPPPSILRHRGMDLPGGIVSPSPQQQQQQQQPFSGSLNAQQ
MFGPGMDPLTTMSNNLSGLNLSGPNGAFNFGNMLTSPSRLMGPGGSPYPLNPMQMPQPLP
PPPNVGNLGRMLPGGPQQPPTPSSAPNPNNPVMADLQIPVSKEVEEEVNSYFQRIYNHQP
NPTLSIDEVLDILQRFKESSNRREQEVFLCMLRNLFEEYRFFCQYPEKELQITAQLFGGI
IDRNLVPTFVALGLSLRCVLDALRKPDGSKLYYFGVTALDRFKTRLHTYNKYCEHIRSIP
HFSDFPQHLIQYVEYGMHGQEPPPHKLVGLSNTISALATGPPTEPLYRTSAMQGHVPATA
APSSGQKTTVAVSHATRMKSIANATNIDTLLVANQEEKVTVPPEPVQDKTAFIFNNLSQL
NIPQKCDEIKEIMTQEYWPWLAQYLVLKRASMEFNFHTLYYNFLDALKNGEINRFVTKET
LRNIKVLLRSDKGVINFSDRSLLKNLGHWLGMMTLGRNRPILQLDLDLKSLLAEAYHKGQ
QELLFVVPFVAKILESSAKSKIFRYPNPWTMGIMYVLGELHQEPDLKLNLKFEIEVLCKT
LNLELAKLRPVIYLKDPTRALHIEHQMSQPKPKQTESVPSPAAIQAIQQPPPPPQQQQQQ
QQQQQPPPQQQQQQQQPPPPPPAEVDAAQAAAMMMNAAGGGSNNASGSVTSPSLPIDPSQ
VSLPPPEPRYSYVEVNVTNFQLIAQQLVLPPNIPLLHANPGTKHIVINAVERTITDWLQP
VVDRSIRIACATTEQIIRKDFALDADENRMRTAAHQMVRNLAASMAMITGKDEIARAISQ
NLHKAFVSALTGMPSLSEIQAASMQLASENVELVCAFIQKTSAEKAVLEIDRRLSTDIET
RKIAREEGNRFVDAQILSYQQERLPEAVRIKVGAAPATLYAVYSEFARTIPGFQQMSDRD
IALFAPKPQDLPPPNVFANDDSSMVYAEVAAKMEAFMNTAINVPTLQLQAGKMHMLLNAL
MSTRRLRDQESAFILLTRAVEGLTEGLINVQEHLEQMKLYRDIHLRILSLLHNSFGAPNT
ERAVTKCFFEIREEARFNVEAARALITAHFVNLNQFDGMLRDCMDNGNNYMAISFGIGLL
ERLIVEDRAINIVSDNEFMATVELLGRLTQHRHRYPECIVNAIDTLWSGNFNSTADYSPF
NANERSLAGASQYIHSGMLHVRSCDTDDPPGLQEKTEFLLKDWVALYAQQTQQTTRDARN
FGAFVQKMNTYGILKTDDLITSFFRQATNICTDVVYRMFADSSMPINQAKNKIFQWIDAF
VHLIAMLVRHSGEPGNPTTKINLLNKVLGIVLGTLLKDHERRGVSFQQVGYHRFFMMLFM
ELCSADVNLDSLMHSIVSAFAYTYHQLKPSVAPGFCFAWLELISHRVFLGRILVQIPGQK
GWPLYAQLLQDLFKYLAPFLRNTELGKPVQLLYKGTLRVLLVLLHDFPEFLCDYHFGFCD
TIPPNCVQMRNIILSAFPRNMRLPDPFTPNLKVDMLSDSSNAPKVLSSYIVNIKPPNFKK
DLDSYLKARAPVTFLSELRGHLQVTSEPGTRYNMTLMNALVMYVGTQAIALIRNKNFVPN
TSNIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCAVLHLFAEANSE
AIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHDFVHCAPEITKLFESVAR
SCLAKSNVTQQLNMAIIDGESQEVGNIN
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagagaacttgaaaacaccgccaacgcagcttcgtaatttggttaaacacgtg
aacaagcgaaattttaatgaaaccagcgagcaaataaaccagtttatcaaagaccacggc
ctggaagctgatcgtagcagtctgcgctatctgttcactgcgatcaacttcagtgaccca
tcgccgaccgtcaccgtccagttgcaagccaaattactcggtggccagttgcagcggcag
ttgcaaagctcctcgtttgtgtccaacatctgcttcgcgtttgaccagcactttgccaac
agccaaaagtctctcaagccgtctgagacagcagagctcattggccaggtgtgcagactg
accggcctaaacaagctctgcgagtgcgtatttgccttggcggtgacccactcgacgcat
ccagagcttcgagaatcggccagagactgcttgcgaggctccataaccgagctgctcgat
tcctatttggggaacaacaacagctcctcagctaccagtgggctgcaagatatatcgatc
gatcttctgcagtatttgctgtgctgcctcaagaaatacgtgacgccgaagcggcacgag
caatttttgatcaaactacgtgaggagtttccgcggcaggcggtgcctttgattttggct
ccgttcctttacggctcaacgacggtggcgacctcgaatacagttggggccaacgccagc
gaaactgatgcagaggctgaggcaacgacaacgacagagacagagacggccagcagcagc
atcagccccagcactagcagcaacagttgcggcacggatgccttgaatgaggttggaatc
gaggatatctatgataatttaagcgaaataatattcacaaaccagggtaaaaataatatt
atggacacatcttggattaatctaatccttgaaatcggttacgaatttacatcgagcgtc
gaagagtgtaaaaatcacctgtgctctcgcgaacgagagcgcaccgaactccagccaaaa
gatgttgccaaaatcgttggtctcatgtgccggcggcactcgtctttgctcgattgtaat
gtaaatctaccgacgccagctaatttctggcctagacagggtcaaggcggtggcagcaac
agtagcgggggctcgtcccaagcacaggccaccccagcgcagcagggacagaactcaagc
agcaacagtaacaacaacgatggtgccagcgacggtggaggcagctcgtccagtgataag
aaggacaagaaggagacgacagatgccacacagacatggaagccggatgtctttgtgcag
gcactcaaggaactggtgccacagctcaactggaaggacgtctgcattgagctcgatcat
tccgagtttgtgctgaaggatcgcatcggcttggacctgctgttgacaattctgcgactg
gccacacagtcgaacatctttccacatccagaatgcatttaccgccactgggccaacacg
gagggtcagctgtcgctgatctctacgctgctaaagaatccggatctgttctcctttgcc
gactttgtgttcagtcagccaacgctggatgttctgaagacggctccggatgcggacaac
aaggagatttcggcctggaagtccctccaccttgtcgaggtcctgctctctcttgcggac
aagggctactacacgcaggtccatgagctgttcaagttccctgcacagaactgcccggac
gtcctgtttttggcacttctgcacataaatccaccactgacaccgctgcggcaggacttg
ttcaaattgctgataccgactttcctcaacaatcatcccaactcgaatgtgatcctggcc
agcgcctggagctcgaccaacttttcgctgcggccgaccattatgaacgccatgtccgag
tggtatctgcgcagcagcgactttgatcaggtcaagctgtcgcgcattctcgatctcgcg
caggacctgaaggcgctctcgtcgctcctgaatgcacgctcctttctgttcatcatcgat
ctggcttgcctggcctccaggcgggagtacttgaagctggagaaatggctgaccgataag
atccgcgatcatggtgagcccttcatgcaggctatgataaaggtgctgctgcggcgctgc
ccacaggtggccaatgccaaggtgcccgaggaacagttgccaccgaaacaggcccagctg
ctgcccgagacggtaaccacgatgatcaattgcctccagacgtgcatcaacagttgcatg
cagcccgagatggtcgagatgatcatgcagatgaccgccaatgtggccattatggcgaat
aaggcacgtgcccaacagcagcagcagcaacaacaacagcagcccggtctggtgccgcca
ccgccgccgagtattctgcgtcatcgcgggatggatctacccggtggcattgtttcccca
tcaccgcagcagcagcagcaacagcagcagcccttctccggcagcctcaatgcccagcaa
atgttcggccccggcatggatccactcaccactatgtcgaacaatctgtcaggcctcaat
ctgagtggaccgaatggagccttcaactttggaaatatgttaacatctccgtcccgcctg
atgggtcccggaggcagcccctatcctctgaatcccatgcagatgccgcagcctctaccg
ccgccaccgaatgtcggaaatcttggtcgcatgctacccgggggaccgcaacagccgcca
acaccatcatcggcacccaatcccaacaatccggtgatggctgacctgcagatacccgtg
tccaaggaggtggaagaggaggttaactcgtatttccaacgcatatacaaccatcagccc
aatccgacgctctcgattgacgaagtgctggacatactgcagcgcttcaaggagtccagc
aatcgacgggagcaggaggtcttcctgtgcatgctgcgaaacctgttcgaggagtatcgc
ttcttctgccagtatccggaaaaggagctacagatcaccgctcaactgtttggcggcatc
atagaccgcaacctggtgcccactttcgtggcgctcggtctctcgctgcgctgcgtcctg
gatgccctgcgcaagccagacggctccaagctctattactttggagtgacggccctcgat
cggttcaagacacgactccacacatacaacaagtactgcgagcacatccgctccattccg
cacttctcggactttccgcagcacctcatccagtatgtggaatatgggatgcacggccag
gagccgccgccgcataagctggtgggcctgagcaacacaatctcggccctggccacagga
cccccgacggaaccgctctatcgcaccagtgccatgcaaggccatgtgccggcaactgca
gctcccagctccggccagaagaccactgtggctgtgtcgcatgccacgcgcatgaagtcc
attgccaatgcgacgaatatcgacactctgctggtggccaatcaggaggagaaggtgacg
gtgccgccggaaccggtgcaggacaagacggcctttatattcaacaatctcagtcagctg
aacataccgcaaaagtgcgatgagattaaggagattatgacccaggagtattggccatgg
ctggcccagtatctagtcctcaagcgagcctccatggagttcaactttcacacgctctac
tacaactttctggatgcactcaagaacggcgagatcaatcgttttgtgaccaaggagacg
ctgcgcaacatcaaggtgctactgcgctccgacaagggtgtgatcaacttctcggaccgc
agtctgctgaagaatctcggccactggctgggcatgatgaccctgggtcgcaaccgacct
attctgcagcttgacctcgacctcaagtcgctactggccgaggcctatcacaaggggcag
caggagctactgttcgttgtgccttttgtggcaaagatcttggaatcgtcggcaaagtcg
aaaatcttccgttaccccaatccctggacaatgggcatcatgtatgtgctgggggaactg
catcaggagccggatctcaagctgaacctcaagttcgaaatcgaagttctctgcaaaacg
ctcaatctggagttggccaagttgcggccagtcatctacctgaaggatcccacacgggcc
ctgcacatcgagcatcaaatgtcccagccgaagcccaagcagacggaatctgtgccttcg
ccggcagcaatccaagcgatccaacagccaccgccgccgccgcagcagcagcagcaacaa
caacaacaacagcagccgccaccacagcaacaacagcagcagcaacaacctcctccaccg
cctccagcggaggtggatgccgcccaggcggcagccatgatgatgaacgctgctggagga
ggctcgaacaacgcatcaggatcggttacctcgcccagtctgcccatcgatcccagtcag
gtgtccctgccacctccagagccacgctactcctacgtggaggtcaacgtgaccaacttc
cagctaatagcccagcagctggtgctgccacccaacatacccctcctgcacgccaatccg
ggcaccaagcacatcgtcatcaatgccgtggagcgcaccattaccgattggctgcagccc
gtcgtggatcgcagcatccgcatcgcctgcgccaccacggagcagatcatacgtaaggac
tttgccctggatgcggatgagaaccgcatgcgcactgctgcccaccaaatggtgcgcaat
ctggctgccagcatggccatgattaccggcaaagacgagatcgcgcgcgccattagccag
aatctacacaaagcctttgtgtcggctctgacgggcatgcccagcctctcggaaattcag
gccgcctccatgcagctggccagcgagaatgtggagctggtgtgcgccttcatccagaag
acatcggccgagaaggcggtcctcgagatcgatcggcgcctttccaccgacatcgagacg
cggaagattgcccgcgaggagggaaatcgctttgtggatgcccagatcttgagctatcag
caggagcgactgccggaggctgtgcgcatcaaggtgggcgctgccccggccacactgtat
gcggtctactcggagtttgctcgcaccattccgggattccagcagatgagcgacagggac
attgccctgttcgctcccaagccgcaggacctgccaccgccgaatgtgttcgccaacgat
gacagcagcatggtgtacgccgaagtggccgccaaaatggaggcctttatgaacacggct
attaatgtgccgacgctgcaactgcaggccggcaaaatgcacatgctcctcaacgccctg
atgtctacgcgtcgtctgcgcgatcaggagtctgcgttcattctgctgacccgcgccgtc
gagggtctcaccgagggactcatcaacgtccaggagcacttggagcagatgaagctctat
cgcgacattcacctgcgcatcctcagtctgctgcacaacagctttggggcccccaacacc
gagagagcggtgaccaagtgcttcttcgaaatccgcgaggaagcccgcttcaacgtggag
gccgcccgtgccctgatcactgcgcactttgtcaacctcaatcagttcgatggcatgctg
cgcgactgcatggacaatggcaacaattacatggccatctcgtttggaattggtctgctc
gagcgccttattgtggaggatcgggccattaacattgtgtccgacaacgagttcatggcc
accgtcgagctgctcggccgcctcacccaacatcgccatcggtatcccgagtgcattgtc
aatgccatcgatacactgtggtccggcaacttcaactccaccgctgactacagtccgttc
aatgccaacgagcgttctctggccggtgcctcccagtacatacactccggcatgcttcac
gttaggtcatgcgacacagacgatccgccaggcttgcaggagaagaccgagttcttgctc
aaggactgggtggccctctacgcacagcagacccaacagacgacgcgcgatgcccggaac
tttggtgcctttgtccagaagatgaacacctatgggatactaaagacagacgatttgatc
acaagcttctttcggcaggcgacgaacatctgcacggatgtggtgtaccgcatgtttgcg
gattcgagcatgcccattaaccaggcgaagaacaagatattccagtggatcgatgcgttt
gtgcatctgattgcgatgctcgtgcgacactctggcgaaccgggtaaccccacaaccaag
atcaacctgctgaacaaggtgctgggcattgtgctgggcacactgctcaaggatcacgag
aggcgtggcgttagcttccagcaggtgggctaccaccggttctttatgatgctcttcatg
gagctgtgctcggccgatgtcaacctggactcgctgatgcacagcattgtgtcggccttt
gcctacacataccaccagctcaaacccagtgtggcgcccggcttctgctttgcctggctg
gagctcatttcacaccgcgtcttcctcggccggatactcgttcagatacccggccagaag
ggctggccactgtacgcccagctgctgcaggatcttttcaaatatctggccccattcttg
cgcaacacggagctgggcaaacccgtgcagctcctctacaagggcaccttgcgcgtcctg
ctggtgctgctgcacgactttccagagttcctgtgcgactatcatttcgggttctgcgac
accataccgcccaactgtgttcagatgcgcaacatcatcctgtcggcattcccgcgcaac
atgcgcctgcccgaccccttcacgcccaacctcaaggtggacatgctctcggacagcagc
aatgcccccaaggtgctcagcagctacatcgtgaacatcaagccgccgaacttcaagaag
gacctcgactcttacctcaaggcacgcgccccagtcaccttcctctcggagctgcgcggc
catctgcaggtgaccagtgagccgggcacccgctacaacatgacactgatgaatgccctg
gtcatgtatgtgggcacacaggcgattgcactcatcaggaacaaaaactttgtgcccaac
acttccaatattgcacacagcgcgcacatggatatcttccagaatctggccgttgacttg
gacaccgagggtcgctatctgttcctcaatgcgattgccaatcagttgcggtatcccaac
agccacacgcactactttagctgtgccgtcttgcacttgtttgccgaggcaaactcggag
gcgatccaggagcaaatcacgcgtgttctactcgagcgtttgattgtgaaccggccgcat
ccgtggggtctgctcatcaccttcattgagctgatcaagaaccccatctacaagttctgg
gatcacgattttgtgcactgtgctccggagataaccaagctcttcgaatctgtggctcgc
tcctgcctggccaagtcgaacgtcacccaacagctgaacatggccatcatcgatggagag
agtcaggaggtgggcaacattaactga
DBGET
integrated database retrieval system
