Drosophila mojavensis: Dmoj_GI19666
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Entry
Dmoj_GI19666 CDS
T01062
Name
(GenBank) uncharacterized protein, isoform D
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dmo
Drosophila mojavensis
Pathway
dmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dmoj_GI19666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dmo03019
]
Dmoj_GI19666
Messenger RNA biogenesis [BR:
dmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Dmoj_GI19666
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Dmoj_GI19666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_1st
CNOT1_CAF1_bind
NOT1_connector
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
DUF4327
NCU-G1
Mucin
Motif
Other DBs
NCBI-ProteinID:
KRG04046
UniProt:
A0A0Q9XGW3
LinkDB
All DBs
AA seq
2525 aa
AA seq
DB search
MNVENQLTPLKQIRNLVKHVNKRNFNESNEQIKQFIQDYALEADRSCLRYLFTVLNLNDP
SPNVTAQLQAKLLGAHLQRQLQCSSFVTNICFAFDQHFAKQKGLKPFALSELVGQVAKLT
GINKLCECIFALAVTHSSHPELRQSARENLRSSLPELLNSYLGNNSASAATASGLHEISF
DLLQYLLCCLREYVTPQLESQFLRKLREEFPREAVPLVLAPLLYRNTTTTATTTTAAKSN
DDEETDAEEETTNTNTTNTSSWSSSNADNLNEVGIEDIYDHLSEIIYSNQGKNNIMDTSW
INLILEIGYDFTSSVEDCRNHLCCGCGSRELQPKDVAKIVGLMCRRHLSLLDCNVNLPTP
ANFWPGQQQGAGSSSSNASQSAQQQNSTSSNNNNDGSSESSSAASEKKDKKETTDATQTW
KPEVFVQALKELAPQLNWKEVCMELDHPEFVLKDRIGLDLLLTILRLSTQSKLFPQPECI
YRHWSNTEGQLSLITTMLQNPDLFSFADYVISQPALDVLKTPPDAEKKEIAAWKSLHLVE
VLLSIADKGYYSQVHELFKFPAQNCPDVLFLALLHINPPLTPLRQDLFNQLIPTFLGNHP
NSNVILASAWSSTNFQLRPSIMNAMSEWYLRGSEFDQVKLSRILDLAQDLKALSSLLNAR
SFLFIIDLACLASRREYLKLEKWLSDKIRDHGEPFMQAMIKVLQRRCPQVTNSKLPEDQL
PPKQAQLLPETVTTMINCLQACINTCMQPETAEMIMQMAGNVAILANKARAAQQQQQQVP
PSLVPPPPSILRGHRGMDLPGGGIVPGSVPPPPQQQQQQQPFSGNLNAQQMFGPGGMDPL
TNMSNNLAGLNLGGPNGAFNFGNMLTSPSRLMTAGANPYPPIPIQITAQPPPNVGNLGRM
LPAGPQPAPTPPNPNNPVMADLQMPVSKEVEDEANSYFQRIYNHQPNPTLSIDEVLDILQ
RFKESSHRREQEVFLCMLRNLFEEYRFFSHYPEKELQITAQLFGGIIDRNLVPTFVALGL
SLRCVLDALRKPEGSKLYYFGVTALDRFKTRLHTYNKYCEHIRSIPHFNDFPQHLIQYVE
FGMHGQEPPPQKLIGLSNTIPSSAIAQGAAEPLYRANSMPGNMPTAPNVQKPPVVLAHAA
RMKSIANATNIDTLLVANQEEKITVPPEPIQDKTAFIFNNLSQLNIPQKCEEIKEIMTKE
YWPWLAQYLVLKRASMEFNFHTLYYNFLDALKNVEINRYVTKETLRNIKVLLRSDKGVIN
FSDRSLLKNLGHWLGMMTLGRNRPILQLDLDLKSLLAEAYHKGQQELLFVVPFVAKILES
SAKSRIFKSPNPWTMGIMYVLGELHQEPDLKLNLKFEIEVLCKTLNLELEKLKPVIYLKD
PSRPLLIEQQMSQPKPKVVEAPPQQQQQQQQQQQHPQQQQQPPQPPPSAEVDAQAMMMSN
ANASGSVSSPNLPTDPSQVVLPPPEPRFSYLEVNVNNLQLIGPQLVMPNNIPFLHSNPGF
KHIVVNAIERTITDWLQPVVDRSIRIACATTEQIIRKDFALDADENRMRTAAHQMVRNLA
AGMAMITGKDEIARAISQNLHKAFMAALTGVPSMSDIQAASMQLANENVELVCAFIQKTS
AEKSALEIDRRLSTDFETRKIAREEGSRFVDAQILSYQQERLPEPVRLKVGPAPPTLYAV
YSEFARSIPGFQQMSDRDIALFVPKPQDLQPPNVFANDESSMVYAEVASKMEAFMNTAIN
VPTLQLQASKMHVLLNALMATRRLRDQESAFNLLTRAVEGLTEGLINVQDHMEQMKLYRD
IHLRILSLLHNSFGAPNTERAVTKCFFDIREEVRYNVEAARALITSHFVNLNQFDGMLRD
CIDNGNNYMAISFAIALLERLIMEDRVINVVSDNEFMATVEVLGRLSQQRHRYPECIANA
IETLWSGNLNTSDYGSFNPGERYPTGASHYIHSGMHHVRSSDMDDPPGLQEKTEFLLKDW
VALYTQQNQQTTRDARNFSAFVQKMNSYGILKTDDLITRFFRQATQICTDVVYRMFGDPN
LPINQAKNKIFQWIDAFVHLIAMLVRHSGEAGNPTTKINLLNKVLGIVLGTLIKDHEMRG
VGFQQVGYHRFFMMLFMELCSADSTLESLMHSIVSAFAYTYHLLNPSVAPGFCFAWLELI
SHRVFLGRILVQIPGQKGWPLYSQLLQDLFKYLAPFLRNTELGKPVQLLYKGTLRVLLVL
LHDFPEFLCDYHFGFCDTIPPNCVQMRNIILSAFPRNMRLPDPFTPNLKVDMLSDSSNAP
KVCKSYINNIQPANFRNDLDSYLKARAPVTFLSELRGHLQVTTEPGTRYNMALMNALVMY
VGTQAIALIRNKNFVPNTSNIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHT
HYFSCAVLHLFAEANSEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPIYKFWDHD
FVHCAPEITKLFESVARSCLAKSNVTQQLNMAIDGGAGGAGGGVGGGGGGGGAVVVDNQE
VVNIN
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagagaaccaattgacgcctctaaagcagattcgtaatttggtcaaacacgtg
aataaacgaaattttaatgagagcaacgaacaaataaagcagtttatccaagattacgcc
ctcgaagcggatcgtagctgtctgcgatatctgttcacggtacttaacttgaacgatccg
tcgccgaacgtcaccgcacagctgcaggcgaagctcttgggcgcccatttgcagcggcaa
ctgcagtgctcctcgtttgtcacaaatatatgctttgccttcgatcaacattttgccaaa
caaaagggtctgaaaccatttgcactctctgagttggttggacaggttgccaagctaact
ggcattaacaagctttgtgagtgcatttttgcattagcggttacccatagctcgcatcca
gagctaaggcagagcgctcgagaaaatttacgtagctctttgcctgaactgcttaattcg
tatttgggtaacaattcagcctcagcagcgactgctagtggtcttcacgaaatctctttt
gatttgttacaatatttgttgtgctgtttgcgggagtacgtcacaccccagctggagtca
cagtttttgaggaaactgcgcgaggagtttccacgtgaggcggtgccattggtcttagcg
ccacttttgtatcgcaacacgacgacaacagcaacgacgacgacggccgccaaatcgaac
gacgacgaagaaactgatgcagaggaggaaacgacgaacacgaacacgacgaacaccagc
agctggagcagctcaaatgcagataatctgaatgaagttggcattgaggatatctatgac
catttatccgagataatatactcaaatcagggcaaaaataatattatggacacatcttgg
attaatttaatccttgaaatcggttatgactttacatcgagcgttgaagattgtagaaat
catttgtgttgcggctgtggatcacgcgaactgcagcccaaagatgttgccaaaattgtt
ggcctcatgtgtaggcgacacttgtcgctgcttgattgcaatgtaaatttgccaacgcca
gcaaatttttggccaggccaacagcagggcgcaggcagcagcagctccaatgcttcacaa
tcagcacaacagcaaaattctactagtagcaacaacaataacgatggcagcagcgaatcg
agcagcgcggccagcgagaaaaaagataagaaggagacaacagatgcaacacagacatgg
aagccagaggtgtttgtgcaagcgctcaaagagttggcgccacagctcaactggaaggaa
gtttgcatggagctcgaccatccagagtttgtgctaaaggatcgcatcggtttggatttg
ctgttgaccattttgagattgtcgacgcaatcgaaactctttccgcaaccggaatgcatt
tatcgtcactggtctaacacagagggtcaattgtcgttgataacgacaatgctgcagaat
ccagatctattctcattcgccgattacgtaatcagtcagccagcattggatgtgctaaag
acgccacccgatgccgagaaaaaggagatagctgcatggaaatccctgcacttggttgag
gtgttgctgtcgattgcagacaagggctactacagtcaggtgcacgaactctttaagttc
ccggcgcagaattgtccggacgtgctattcttggcactgctgcacataaatccacctttg
acaccattgcggcaggatctattcaatcagctaatacccacatttctgggcaatcatcct
aattcgaatgttatcttggccagcgcctggagttccaccaattttcagctgcggccaagt
atcatgaacgccatgtcggaatggtatttgcgtggcagcgaattcgatcaggtgaagctg
tcgcgtattcttgatttggcccaggacctaaaggcactgtcctcgctgctcaatgcacgc
tcgtttctgtttatcatcgacttggcatgtctggcatcgaggcgcgagtacttgaagctc
gagaagtggctgagcgataagatacgcgatcatggtgagccctttatgcaggcgatgatc
aaggtgctgcaacgccgttgcccgcaagtaacgaactccaagctgcccgaagatcaactg
ccgcccaagcaggcgcaattgctgcccgaaacggtcaccacgatgatcaattgtctgcaa
gcgtgcatcaatacatgcatgcagccggagacagctgagatgattatgcaaatggctggc
aatgtggccatcctggcaaacaaagctcgtgccgcacagcagcaacaacaacaggtgcca
ccgagtctggtgccgcctccgccgagtattctgcgtggacaccgtggcatggatctgcca
ggaggaggcatcgtgcctggctcagtgccaccgccaccgcagcaacaacaacagcagcag
cccttctcaggcaatctgaatgcccagcaaatgtttggcccgggcggaatggatcctttg
acaaacatgtccaacaatctggctggtctcaatctgggcggtcctaacggcgccttcaac
ttcggcaatatgctgacatctccatcgcgtctcatgacggccggcgccaacccctatccg
ccgatacccatacaaatcacagcgcaaccgccaccaaatgttgggaatctgggacgtatg
ctgccagcgggaccgcagccagcgccgacgccaccaaatccgaataatccagtcatggcc
gatttgcagatgcccgtttccaaggaggtggaagatgaggccaactcgtactttcagcgc
atctataatcatcaaccgaatccgacgctttcgattgatgaagtactcgacatactgcaa
cgcttcaaggagtccagtcatagacgcgagcaagaggttttcctttgcatgctgcgcaat
ctgttcgaggaatatcgcttcttctcccattatcccgagaaggaactgcagataaccgct
caactcttcggcggcatcattgatcgcaatttggtgcccacattcgtggcgcttggtcta
tcactccgatgcgttctggatgcattgcgcaaaccggaaggatcgaagctctactacttt
ggtgtaacggcgcttgatcgattcaagacgcgtcttcacacctacaacaaatactgtgag
cacattcgctccataccgcatttcaacgactttcctcagcacttgatacaatatgtcgaa
ttcggcatgcatggccaggagccgccgccccagaagttgattgggctgagcaatacaata
ccgtcgtcggctatagcacaaggagcagctgaaccgctatatcgtgccaattcaatgcca
ggcaacatgcccacagctccgaatgtacaaaagccgcctgtggttctggcgcatgccgcg
cgaatgaaatccattgcgaatgccacaaatatcgataccctgctcgtagccaatcaggag
gagaagataactgtgccgccagagcccatacaggacaagacagccttcatcttcaacaat
ctcagccagctgaatataccgcaaaagtgcgaggagatcaaagagatcatgaccaaagag
tattggccatggctagcacaatatttggtgctcaaacgtgcctcgatggagttcaacttt
cacacgctgtactacaactttttggatgccttgaagaatgttgagattaatcgctatgtg
accaaggagacgttgcgtaacatcaaggtactgctacgctctgataagggtgtgatcaat
ttttcggatcgcagtctgctcaagaatctcggccattggctgggcatgatgacactcggt
cgcaatcgtcccatattacaattggatttggatttgaagtccctgctggccgaggcgtat
cacaagggtcagcaggagctgctgtttgtggtgccattcgtggcaaagatcttggaatca
tctgccaaatcgcgcatattcaaatctcccaatccctggacaatgggcataatgtatgta
ttgggtgaattgcatcaggagccggatctcaagctcaatctcaagttcgaaattgaagtt
ttgtgcaaaacactgaatttggaactggagaagctcaaacctgttatctacctgaaggat
ccatcgcgtccgctgttgatcgaacagcaaatgtcgcagcccaagccaaaggttgttgag
gcaccacctcaacaacaacagcagcaacaacagcagcagcaacatccacagcagcagcaa
caaccaccgcagccaccgccatcagctgaggtcgatgcacaggccatgatgatgtccaat
gcgaatgcatctggctctgtgtcgtcgcccaacttgccaacagatcccagccaggtggtc
ttgcccccgccagagccacgtttctcctatctggaggtgaatgtcaacaatttgcaattg
attgggccgcaactggtgatgcccaacaatattccatttctgcactccaatcccggcttc
aagcacatcgttgtcaatgccatcgagcgcacaattaccgattggctgcagccggtggtg
gatcgtagcatacgcattgcatgcgccacaactgaacagatcatacgtaaggatttcgct
ctggacgcggatgagaatcgcatgcgcactgccgcccatcagatggtgcgcaatctggcc
gccggtatggccatgattactggaaaggacgagatcgcacgggcgattagccagaacttg
cacaaagcgttcatggccgcgttgacgggtgtgccgagcatgtccgacatacaggctgca
tcgatgcagctagccaacgagaatgtcgaattggtctgtgcatttatacaaaagacatcg
gctgagaagtcggcgctcgagatcgatcgacgactgtcgaccgactttgagacgaggaaa
atagcacgcgaagagggcagccgatttgtcgatgcacaaatcttgagctatcagcaggag
cgtttgccggagccagtgcgtcttaaggtgggcccagctccacccacactgtacgccgtc
tattcagagttcgcgcgcagcattcctggcttccagcagatgagcgatcgcgatattgct
ctgttcgtgccgaagccacaggatctgcagccaccgaatgtgtttgccaacgatgagagc
agcatggtctatgccgaggtagccagcaaaatggaggcgttcatgaatacggccatcaat
gtgccgacgctccagctacaggcgagcaagatgcacgtcctgctcaatgccctgatggcc
acgcgacgcttgcgtgatcaggagtcggcattcaatctgctgacacgtgccgtggagggt
ctgaccgagggcctgatcaacgtccaggatcacatggaacaaatgaaactctatcgtgac
attcacttgcgcattctgagcttgttacacaacagctttggagcacccaatacggagcgt
gcggtgaccaaatgcttctttgatatccgtgaagaggtgcgctacaatgtggaagctgca
cgcgcgctgatcacctcacatttcgtgaatctgaatcagttcgatggcatgttgcgcgac
tgtatcgacaatggcaacaactatatggccatctcgtttgccattgcactgctcgaacgt
ctcatcatggaggatcgtgtcataaacgttgtatccgacaatgagttcatggccacggtt
gaggtgcttggacgtctgtcacagcagcgtcatcgctatcccgaatgcatcgcgaatgcc
attgagaccttatggtcgggcaatctgaacacaagtgattatggctcgttcaatccggga
gaacgttatccgaccggcgcatcgcattacatacactctggcatgcaccatgtccggtca
tcggatatggatgatccgccaggcctgcaggaaaagaccgaatttttgctcaaagattgg
gtcgctctctacactcaacagaatcagcaaacaacacgagatgcgcgcaacttcagcgcc
ttcgtgcagaagatgaacagctatggcatcctcaagacagatgatttgattacccgcttc
ttccgacaggcaacacagatctgcaccgacgttgtctaccgcatgttcggcgatcccaat
ttgcccatcaatcaggcgaagaacaagatattccaatggatcgatgcctttgtacatttg
atcgctatgctggttaggcattcgggcgaggctggcaacccgacgacaaagatcaatttg
ctcaataaggtgctgggcattgtgctgggcactttgatcaaggatcatgagatgcgcggc
gttggcttccagcaagtgggctatcaccgcttcttcatgatgctgttcatggagctgtgc
tctgcggacagcactctggaatcgctgatgcacagcattgtgtcggcctttgcctacaca
tatcatctgctcaatccaagcgtggcgcccggcttctgttttgcctggcttgagttaatc
tcacatcgcgtcttccttggccgcatcctggtccagatacctggccaaaagggctggcca
ttatattcacagctattgcaggatctcttcaaatatctcgcaccattcttgcgcaacacc
gagctgggcaagcccgtacagttgctctacaagggcacgctgcgtgtcctgctcgtgctg
ttgcacgatttcccagaattcctctgcgattatcactttggtttctgtgacactattccc
ccaaattgtgttcagatgcgtaacattatattgtccgcatttccacgcaatatgcgtctg
ccggatccgtttacgcccaatctgaaagtcgacatgctctcggacagcagcaatgcaccg
aaagtgtgcaaaagctatatcaacaatatacagccagccaatttccgtaacgatctcgat
tcgtatttaaaggcacgcgcccctgtcactttcctatcagagctacgcggccatttgcag
gtaaccacagagccgggcacacgttacaatatggccctgatgaatgcgttggtcatgtat
gttggcacccaggccattgcactgatcagaaacaagaacttcgtaccaaacacctcgaac
atagcgcacagcgctcacatggacatcttccagaacctggctgtcgatctagatacagag
ggtcgttatctgttcctcaatgcgatcgccaatcagttgcgctatccgaatagccacaca
cactatttcagctgtgccgtcttgcatttgtttgccgaggccaattcggaggccatacag
gagcagataacgcgtgttctactcgaacgtctgattgtaaatcgtccacatccatggggc
ctattgatcacattcattgaactgatcaagaatccgatctataagttctgggatcacgat
ttcgtgcactgtgcacccgagataacaaaactctttgaatcagtcgcccgctcctgcttg
gccaaatcgaatgttacccaacagttgaacatggccattgatggtggagcaggcggagct
ggtggtggagttggcggcggcggcggaggtggcggcgccgttgtagtagacaaccaggag
gtggtcaacattaactga
DBGET
integrated database retrieval system
