Oceanidesulfovibrio marinus: E8L03_17485
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Entry
E8L03_17485 CDS
T06743
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dms
Oceanidesulfovibrio marinus
Pathway
dms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E8L03_17485 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dms03019
]
E8L03_17485 (pnp)
03016 Transfer RNA biogenesis [BR:
dms03016
]
E8L03_17485 (pnp)
Enzymes [BR:
dms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E8L03_17485 (pnp)
Messenger RNA biogenesis [BR:
dms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E8L03_17485 (pnp)
Transfer RNA biogenesis [BR:
dms03016
]
Prokaryotic type
tRNA degradation factors
E8L03_17485 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
QJT10600
LinkDB
All DBs
Position
complement(3989455..3991728)
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AA seq
757 aa
AA seq
DB search
MQSNFDATRLTVNAGGKEIILETGRLANQANGAVWIQCGGTVVLVTVVTQPLDRDISFFP
LVVDYQEKMYAAGRVPGSFFRREMGRPSERETLCSRLIDRPIRPLFPKGFRDEVQVLATV
LSADQENDPDVLAVTGASAALHLSQIPFNGPIAGARVAYVDGEFILNPVSSQIENATLNM
VMAASEEAVVMVEGAADFIPHDVMSKAIEWGHAELQPLLQAQHQMREMAGKPKMEFVPHE
DDADLVAAVEELATDDLLAAVTIPEKMARKDARSAVKKKVLAALEEDARFAEKPEILKAA
PELLGGLEKKLVRKRIKDLGVRIDGRDVTTVRQIKADVGLLPRTHGSALFARGETKALCV
ATLGSGRDEQRVETLMGDENKRFMLHYNFPPYCVGEVKMVRVSRREIGHGNLAERAITPI
LPSAEDFPFTMRVVSEIMESNGSSSMATVCGASLALMDAGVPVSTAVAGIAMGLIKEGDE
YYVLTDILGDEDALGDMDFKIAGSADGITAFQMDIKIAGIPPEVMARALTQAREARVHIL
GEMNKVLEQPRAELSDYAPQLAIVQVDPEVIRMIIGPGGKNIKQITADTGADVDIEDSGK
VSIFAPTKEALEQARERVLYFDQKPEVGKIYEGPVKKILEIGAIVEILPGVEGLVHISQL
ALERVDKVTDVVKLGDTIKVKCLEVLDGGKMRLSRAAILAEEQGIEFKDNPPRRGGGGRG
GDRRGDRGPRGGRGGDRGDRGGRGGDRGGRGGPRSND
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccaatttcgacgccacccgtctgacagtcaatgccggcggcaaggagatcatc
ctggagacaggacgccttgccaaccaggcaaatggcgcagtctggatccaatgcggcggc
accgtggttctcgtaaccgtggtgacccagcccctggatcgcgacatcagcttcttcccc
ctggtggtggactaccaggagaagatgtacgcggccggccgcgtgcctggtagcttcttc
cgtcgcgagatgggccgccccagcgagcgtgagacgctctgctcccggctcatcgatcgg
cctatccgtcccctgttccccaaaggcttccgcgacgaggtccaggtgctcgccaccgtg
ctttccgcggaccaggagaacgacccggacgtgctcgccgtcaccggcgcatcggccgcc
ctccatctctcgcagattcccttcaacggccccattgccggcgcccgcgtggcctacgtg
gatggagagttcatcctcaacccggtgagctcccagatcgaaaacgccaccctgaacatg
gtcatggccgcctccgaggaggccgtggtcatggtggaaggcgcagccgacttcatcccg
cacgacgtcatgtccaaggccatcgagtggggccatgcagagctccagcccctgctccag
gcacagcaccagatgcgcgagatggcaggcaagcccaagatggagttcgtcccccacgag
gacgacgccgatctggtcgccgccgtcgaggagctggccaccgacgacctgctggccgcc
gtgaccatccccgagaagatggcccgcaaggacgcccgcagcgccgtgaagaagaaggtt
ctcgccgcgctggaagaggacgcccgcttcgccgagaagcccgagatcctcaaggccgcg
cccgagctcctcggcggtctggagaagaagctggtgcgcaagcgcatcaaggatctgggc
gtgcgcatcgacggccgcgacgtgaccaccgtccgccagatcaaggccgacgtgggcctg
ctgccgcgcacccacggctctgcactcttcgcccgcggtgagaccaaggccctctgcgtc
gccaccctcggctccggccgtgacgagcagcgcgtggagaccctcatgggcgacgagaac
aagcgcttcatgctccactacaacttcccgccctactgcgtaggcgaggtcaagatggtc
cgcgtctcccgccgggagatcggccacggcaacctggccgagcgcgccatcacgcccatc
ctgcccagcgcagaggacttccccttcaccatgcgcgtggtctccgagatcatggagtcc
aacggctcctcctccatggccacggtgtgcggcgcctccctggcgctcatggacgcaggc
gtgcccgtctccacggccgtcgccggcatcgccatgggcctgatcaaggaaggcgacgag
tactacgtgctcacggacatcctgggtgacgaggacgctctgggcgacatggacttcaag
atcgcgggcagcgccgacggcatcaccgccttccagatggacatcaagatcgccggtatt
ccgccggaggtcatggcccgcgccctgacccaggcccgcgaggcccgggtgcacatcctg
ggcgagatgaacaaggtgctggagcagccgcgcgccgagctctccgactacgcgccgcag
ctggcgattgtgcaggtcgaccccgaggtcatccgcatgatcatcggccccggcggcaag
aacatcaagcagatcacggccgacaccggcgccgatgtggatatcgaggactccggcaag
gtctccatcttcgcccccaccaaggaggcgctggagcaggccagggaacgcgtgctctac
ttcgaccagaagcccgaggtgggcaagatctacgaaggcccggtcaagaagatcctcgag
atcggcgccatcgtcgagatcctgcccggcgtcgaaggcctggtccacatctcccagctc
gctctggagcgcgtggacaaggtcaccgatgtggtcaagctcggcgacaccatcaaggtc
aaatgccttgaggtcctggacggcggcaagatgcgcctctcccgcgccgccatcctggcc
gaggagcagggcatcgagttcaaggacaacccgccccgccgaggcggcggtggccgcggt
ggcgatcgccgtggcgaccgtggacctcgcggcggacgtggtggcgatcgtggcgaccgc
ggtggacgcggcggcgatcgcggcggacgcggcggcccgcgttccaacgattaa
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