KEGG   Dehalococcoides mccartyi CG4: X793_07405
Entry
X793_07405        CDS       T03648                                 
Name
(GenBank) ribonuclease
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
dmy  Dehalococcoides mccartyi CG4
Pathway
dmy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dmy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    X793_07405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmy03019]
    X793_07405
Messenger RNA biogenesis [BR:dmy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     X793_07405
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_NusA_2nd KH_KhpA-B KH_2 LapA_dom DUF4407 DUF1664 BTBD16_C
Other DBs
NCBI-ProteinID: AII60113
LinkDB
Position
1353346..1354884
AA seq 512 aa
MPLSAILAIFFSFIIGIVFGGMALFVFRGFIMNRQLRIAQRKATKMLADSKVEAKDVLVE
AKREADKARNSAEAELKERRSELAKQENRVMQKTEALDRKLENLEQREQSLTNREKSIDE
TQSQIEEIRTAELKRLEEVASMTTEQAKSSLLEMLEGEMQQETSRRLREWEIKIKAEADE
KAREIVSQAIQRCASDVVTETTTNVVPLPSDEMKGRLIGREGRNIRALEQATGVDLIIDD
TPEAVTISSFDPVRREIARQALSKLIIDGRIHPARIEEVVAKAKEEVEAAMIASGEQAAY
QAGVHGLRPEIIKVMGRLKYRTSYGQNVLQHSIEVAQMSGMIGSELGVNVTLARRAGFLH
DIGKAVDRDVEGTHTQIGADMVKQWEKSPEVIKGVAEHHFDTPTVSIWGFIVSAADAISS
ARPGARRESLENYIKRLKALEEIADSFKGVEKSFAIQAGREVRIMVKPEEIDDLGAMRLA
RDIVKKIEDGLEYPGQIKVTVIRETRSVDFAK
NT seq 1539 nt   +upstreamnt  +downstreamnt
ctgcctttatctgccattctggccatcttttttagttttattataggtattgtcttcggc
ggtatggccctgtttgtattcaggggctttattatgaaccgccagctccgcatcgcccag
cgcaaagcaaccaaaatgctggcggactccaaagtggaagctaaagatgtgctggtggaa
gccaagcgcgaagctgacaaggcccgcaattccgccgaagctgaacttaaagaacgccgt
tctgaactggccaagcaggaaaacagggttatgcagaagaccgaagccctggaccgcaag
cttgaaaacctggaacagcgggaacagtccttaaccaaccgggaaaaaagcattgatgag
acacagtcccagattgaagaaatacggacagccgaactgaagcgtctggaagaagtggcc
agcatgaccactgaacaggccaagtcaagtttgcttgagatgctggaaggcgaaatgcag
caggaaacctcccgccgattgcgcgagtgggagataaaaatcaaggctgaagcggatgaa
aaagcccgggagattgtttcccaggctatccagcgctgtgcctctgacgtagttaccgaa
accactaccaatgtcgtacccctgcccagcgatgaaatgaagggcaggctgattggccgc
gaaggccgcaatatacgggcgctggaacaggcaaccggtgtagaccttattatagatgac
accccggaggcagttactatctccagttttgacccggtacggcgggaaattgccagacag
gcactttccaaacttattattgacgggcgtatccacccggcccgcatagaagaagtggta
gccaaagccaaagaggaagtggaagccgccatgatagcttccggcgaacaggccgcctat
caggcaggcgttcacggactgcggcctgaaatcataaaggtaatggggcggctgaagtac
cgcaccagttacggccagaacgtgcttcagcacagtatagaggtagcccagatgtccggc
atgataggcagcgagctgggggtaaatgttacccttgccagacgggccggcttcctgcat
gacataggcaaagcggttgaccgtgacgtggaaggcacccatacccagataggcgcagac
atggtcaagcagtgggaaaaatcacccgaagttatcaagggtgtggctgaacaccacttt
gacacccccaccgtttccatctggggttttatcgtatctgccgcagatgccatttcttcg
gccagacccggtgcccgccgcgaatcactggaaaactacatcaaacgcctcaaggctctt
gaagagattgccgacagcttcaaaggggttgagaaatcctttgccatacaggccgggcgc
gaagtgcgcatcatggtcaaacctgaggagattgatgacctgggtgctatgcggctggcc
agagatatagtcaagaagattgaagacgggctggagtaccccggacagattaaggttact
gttatccgggaaacccggtctgtagactttgccaagtag

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