Dichelobacter nodosus: DNO_0595
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Entry
DNO_0595 CDS
T00517
Symbol
hfq
Name
(GenBank) Hfq RNA-binding protein
KO
K03666
host factor-I protein
Organism
dno
Dichelobacter nodosus
Pathway
dno02024
Quorum sensing
dno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DNO_0595 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DNO_0595 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dno03019
]
DNO_0595 (hfq)
03036 Chromosome and associated proteins [BR:
dno03036
]
DNO_0595 (hfq)
Messenger RNA biogenesis [BR:
dno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DNO_0595 (hfq)
Chromosome and associated proteins [BR:
dno03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
DNO_0595 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ABQ13131
UniProt:
A5EVF4
LinkDB
All DBs
Position
631250..631570
Genome browser
AA seq
106 aa
AA seq
DB search
MSKSQSLQDPYLNALRKERVPVSIYLVNGIKLQGQIESFDAFVILLRNNISQMVYKHAVS
TIVPSRNIHLSREEMGLEDEAGEEISAEYTPNAEGQAEATADPLYD
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagtcacaatctcttcaagacccgtacctaaatgctttgcgtaaagaacgcgtg
ccggtatcgatctatttggtaaatggaattaaattgcaggggcaaatagagtcttttgat
gcttttgttattttgctacgcaataatatttcacaaatggtatataaacatgcagtgtca
accattgttccctctcgtaatattcatttaagtcgggaagaaatgggattggaagatgaa
gccggcgaggaaatcagcgccgaatatactccaaacgcagaaggacaagcggaagcaacc
gccgatccgttatacgattaa
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