KEGG   Dichelobacter nodosus: DNO_0595
Entry
DNO_0595          CDS       T00517                                 
Symbol
hfq
Name
(GenBank) Hfq RNA-binding protein
  KO
K03666  host factor-I protein
Organism
dno  Dichelobacter nodosus
Pathway
dno02024  Quorum sensing
dno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DNO_0595 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DNO_0595 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dno03019]
    DNO_0595 (hfq)
   03036 Chromosome and associated proteins [BR:dno03036]
    DNO_0595 (hfq)
Messenger RNA biogenesis [BR:dno03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DNO_0595 (hfq)
Chromosome and associated proteins [BR:dno03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    DNO_0595 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ABQ13131
UniProt: A5EVF4
LinkDB
Position
631250..631570
AA seq 106 aa
MSKSQSLQDPYLNALRKERVPVSIYLVNGIKLQGQIESFDAFVILLRNNISQMVYKHAVS
TIVPSRNIHLSREEMGLEDEAGEEISAEYTPNAEGQAEATADPLYD
NT seq 321 nt   +upstreamnt  +downstreamnt
atgagtaagtcacaatctcttcaagacccgtacctaaatgctttgcgtaaagaacgcgtg
ccggtatcgatctatttggtaaatggaattaaattgcaggggcaaatagagtcttttgat
gcttttgttattttgctacgcaataatatttcacaaatggtatataaacatgcagtgtca
accattgttccctctcgtaatattcatttaagtcgggaagaaatgggattggaagatgaa
gccggcgaggaaatcagcgccgaatatactccaaacgcagaaggacaagcggaagcaacc
gccgatccgttatacgattaa

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