Desulfomicrobium orale: AXF15_00910
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Entry
AXF15_00910 CDS
T04289
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
doa
Desulfomicrobium orale
Pathway
doa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
doa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXF15_00910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
doa03021
]
AXF15_00910
03400 DNA repair and recombination proteins [BR:
doa03400
]
AXF15_00910
Enzymes [BR:
doa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXF15_00910
Transcription machinery [BR:
doa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXF15_00910
DNA repair and recombination proteins [BR:
doa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXF15_00910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_XRCC3_RpoA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AMD91820
UniProt:
A0A109W5D5
LinkDB
All DBs
Position
complement(212875..213921)
Genome browser
AA seq
348 aa
AA seq
DB search
MTSTYSGDSKVYVRNWAELVRPEQLVRDSKSSDMYGRFVCEPLERGFGTTIGNALRRVLL
SSLQGAAPVSVKIQGIQHEFTTIPGVNEDVTDIVLNLKQLRVAMNTPEPQKVQLIANAKG
VVTAAAIMENQHIRILNPELHIATLSEDIDLVMDLEFRMGKGYVPAEMHEELDNEIGVIT
LDSSFSPIRKVAYAVEQARVGQMTNYDKLIMEVWTDGSVSPEDALAYSAKILKDQLSVFI
NFDEGSADIEKAKSKPQDKINENLFKNIEDLELPVRASNCLKSAGIHIVGELVQKTEADL
LKTKNFGRKSLEDIRRVLESMGLDFGIRVDGFNELYQDWLKRNEEDEA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacttctacgtatagcggagacagtaaggtttacgtccggaattgggcagagttggtg
cgtccagagcagcttgtacgtgattcgaagtcttcggatatgtatgggcggtttgtttgc
gagcctttggaacgcgggtttggcacgacaatcggcaatgcattacgtcgcgtactgctt
tcttctttgcagggcgcagctcctgtttcagtgaagattcagggaatacagcacgagttc
acgactatccccggagtgaacgaggatgtgacggatatcgtgttgaacttgaagcagttg
cgggtggctatgaatacgccggagccacagaaggttcagctgatcgccaacgccaagggc
gttgtcactgctgcggccattatggagaaccagcatatccgcattttgaacccggaactg
cacattgcgacgctttccgaggatattgatctcgtcatggatctcgaattccggatgggc
aaaggatatgtgccggccgagatgcatgaagagctggacaatgagattggcgttataact
cttgactccagtttttctccgatccgcaaggtggcttatgctgtcgagcaggcccgtgtg
ggccagatgaccaactacgataaactgatcatggaagtctggactgacggttctgtttct
cctgaagatgctttggcttacagtgctaaaattctgaaagatcaattgtcggttttcatc
aattttgatgaaggttcggcagatatagaaaaggccaaatccaagccgcaggacaaaatc
aacgaaaatctttttaagaatattgaagacttggagctgcctgtccgtgcgagtaattgc
ctgaaaagcgccggtatccatattgtcggagaactggtccagaagacggaagccgatttg
ctcaagacaaagaattttgggcggaagtctctggaagatattcgccgggtccttgaaagt
atgggattggatttcgggatcagggtcgatggtttcaacgaattgtatcaggactggtta
aagaggaacgaagaagatgaggcatag
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