Desulfosudis oleivorans: Dole_0506
Help
Entry
Dole_0506 CDS
T00610
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
dol
Desulfosudis oleivorans
Pathway
dol02020
Two-component system
dol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dole_0506
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dole_0506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dol03021
]
Dole_0506
Transcription machinery [BR:
dol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dole_0506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Arg_repressor
HTH_21
DUF5054
Motif
Other DBs
NCBI-ProteinID:
ABW66316
UniProt:
A8ZTQ2
LinkDB
All DBs
Position
complement(571857..573299)
Genome browser
AA seq
480 aa
AA seq
DB search
MALDLRQHLKLSQQLVMTPQLQMAIRLLQLNRLEMVDMIQQELSENPALEEAPETAPEDE
LSTDDREAEALPERVEAEKEVSIEEKISDQVEWENYLNEYNSYGGVQFESEAREQPQYES
FVASHKSLKDHLLWQFLMTLPTGQEEAIASLIVGNVDDDGYLKADVAEIAATANAPIEQV
ETILAMLQNFDPPGVCARTLAECLLIQARQLGIDTPVIAGILNNHMKHLESKNYKVIARA
LKTDTEEIVAAVNLIRTLEPRPGRSFKQEDAGYIIPDIYVHKFENDFVIVLNDDDLPRLH
ISPYYRQAMRGRAAGSKEAKEYLQEKIRSATWLIKSIQQRQKTIYAVMNSILKFQRDFFE
KGVAHLRPMILRDVAEDIGMHESTISRVTTNKYAHTPQGIFELKYFFNSAINRTGADSMA
SVSVQDKIRQIIKNENPKKPFSDDKIADILKAANINIARRTVTKYREAMGILSSTKRKQF
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgatctgcgacaacacctcaagctgagccagcaactggtcatgaccccccag
ctgcagatggccattcggctgctgcagctcaaccggctggagatggtggacatgatccag
caggaactgtccgaaaatccggcactggaagaggccccggaaacagcgcccgaagacgag
ctctcaaccgatgacagggaagcggaggcccttcccgaaagggttgaagcggaaaaggag
gtctctattgaagaaaagatctccgaccaggtggagtgggaaaactacctcaatgaatac
aactcctacggcggggtccagtttgaaagcgaggccagggagcagccccagtatgaatcc
tttgtcgcctcccacaagtccttaaaggaccacctgctgtggcagtttctcatgaccctg
cccaccggccaggaagaggccattgccagcctgatcgtcggcaacgtggatgacgatggt
tatctcaaggccgatgtggcggagatcgcggccacggccaacgcgcccatagagcaggtg
gaaaccattctggccatgctccagaattttgacccgcccggcgtatgcgcccggaccctt
gcggaatgcctgttgatccaggcccgccagctgggaatcgacaccccggtgatcgccggc
atcctgaacaaccacatgaagcatctggagtccaaaaattacaaggtcattgccagggca
ctgaaaaccgacacggaagagatcgtggccgcggtcaacctgatccggaccttagagccc
cggcccggcagaagcttcaagcaggaggacgccgggtacatcattcccgatatttatgtt
cacaaattcgaaaacgattttgtcattgttttaaacgacgacgacctgccgcgactgcac
atcagcccctactaccggcaggcgatgcggggccgggccgccggatcaaaagaggccaaa
gagtacctgcaggaaaaaatccggtccgccacctggctgatcaaaagcattcagcagcgg
cagaagaccatctacgcggtcatgaacagcatcctcaagtttcagcgtgatttttttgaa
aagggggtggcccacctcaggcccatgatcctgcgggatgtggccgaagacatcggcatg
cacgaatccaccatcagccgggtcaccaccaacaaatacgcccacacaccccagggcatc
tttgaattgaaatactttttcaacagcgccatcaaccggaccggcgccgacagcatggcg
tcggtcagcgtacaggacaaaattcggcagatcataaaaaacgaaaaccccaaaaagccc
ttcagcgacgacaagatcgctgacatactcaaagcggccaacatcaacatcgcacggcgc
acggtgacaaaataccgggaagccatgggcatcctgtcatccaccaagcgcaaacaattt
taa
DBGET
integrated database retrieval system