KEGG   Desulfosudis oleivorans: Dole_0506
Entry
Dole_0506         CDS       T00610                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
dol  Desulfosudis oleivorans
Pathway
dol02020  Two-component system
dol02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:dol00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Dole_0506
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Dole_0506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dol03021]
    Dole_0506
Transcription machinery [BR:dol03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Dole_0506
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID Arg_repressor HTH_21 DUF5054
Other DBs
NCBI-ProteinID: ABW66316
UniProt: A8ZTQ2
LinkDB
Position
complement(571857..573299)
AA seq 480 aa
MALDLRQHLKLSQQLVMTPQLQMAIRLLQLNRLEMVDMIQQELSENPALEEAPETAPEDE
LSTDDREAEALPERVEAEKEVSIEEKISDQVEWENYLNEYNSYGGVQFESEAREQPQYES
FVASHKSLKDHLLWQFLMTLPTGQEEAIASLIVGNVDDDGYLKADVAEIAATANAPIEQV
ETILAMLQNFDPPGVCARTLAECLLIQARQLGIDTPVIAGILNNHMKHLESKNYKVIARA
LKTDTEEIVAAVNLIRTLEPRPGRSFKQEDAGYIIPDIYVHKFENDFVIVLNDDDLPRLH
ISPYYRQAMRGRAAGSKEAKEYLQEKIRSATWLIKSIQQRQKTIYAVMNSILKFQRDFFE
KGVAHLRPMILRDVAEDIGMHESTISRVTTNKYAHTPQGIFELKYFFNSAINRTGADSMA
SVSVQDKIRQIIKNENPKKPFSDDKIADILKAANINIARRTVTKYREAMGILSSTKRKQF
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggcccttgatctgcgacaacacctcaagctgagccagcaactggtcatgaccccccag
ctgcagatggccattcggctgctgcagctcaaccggctggagatggtggacatgatccag
caggaactgtccgaaaatccggcactggaagaggccccggaaacagcgcccgaagacgag
ctctcaaccgatgacagggaagcggaggcccttcccgaaagggttgaagcggaaaaggag
gtctctattgaagaaaagatctccgaccaggtggagtgggaaaactacctcaatgaatac
aactcctacggcggggtccagtttgaaagcgaggccagggagcagccccagtatgaatcc
tttgtcgcctcccacaagtccttaaaggaccacctgctgtggcagtttctcatgaccctg
cccaccggccaggaagaggccattgccagcctgatcgtcggcaacgtggatgacgatggt
tatctcaaggccgatgtggcggagatcgcggccacggccaacgcgcccatagagcaggtg
gaaaccattctggccatgctccagaattttgacccgcccggcgtatgcgcccggaccctt
gcggaatgcctgttgatccaggcccgccagctgggaatcgacaccccggtgatcgccggc
atcctgaacaaccacatgaagcatctggagtccaaaaattacaaggtcattgccagggca
ctgaaaaccgacacggaagagatcgtggccgcggtcaacctgatccggaccttagagccc
cggcccggcagaagcttcaagcaggaggacgccgggtacatcattcccgatatttatgtt
cacaaattcgaaaacgattttgtcattgttttaaacgacgacgacctgccgcgactgcac
atcagcccctactaccggcaggcgatgcggggccgggccgccggatcaaaagaggccaaa
gagtacctgcaggaaaaaatccggtccgccacctggctgatcaaaagcattcagcagcgg
cagaagaccatctacgcggtcatgaacagcatcctcaagtttcagcgtgatttttttgaa
aagggggtggcccacctcaggcccatgatcctgcgggatgtggccgaagacatcggcatg
cacgaatccaccatcagccgggtcaccaccaacaaatacgcccacacaccccagggcatc
tttgaattgaaatactttttcaacagcgccatcaaccggaccggcgccgacagcatggcg
tcggtcagcgtacaggacaaaattcggcagatcataaaaaacgaaaaccccaaaaagccc
ttcagcgacgacaagatcgctgacatactcaaagcggccaacatcaacatcgcacggcgc
acggtgacaaaataccgggaagccatgggcatcctgtcatccaccaagcgcaaacaattt
taa

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