Dipodomys ordii (Ord's kangaroo rat): 105982434
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Entry
105982434 CDS
T07834
Symbol
Lingo1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dord04131
]
105982434 (Lingo1)
Membrane trafficking [BR:
dord04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
105982434 (Lingo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
Ig_2
ig
LRR_6
LRR_Zer-1
LRR_9
LRR_LRWD1
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
105982434
NCBI-ProteinID:
XP_012867477
Ensembl:
ENSDORG00000024983
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MPAGCTGAPSPLLSCWQPILLLVLGSVLSGSATGCPPRCECSAQERAVLCHRKRFVAVPE
GIPTETRLLDLSKNRIKTLNQDEFAGFPHLEELELNENVVSAVEPGAFNNLFNLRTLGLR
SNRLKLIPLGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVYISHRAF
SGLNSLEKLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS
HWPYLDTMTPNCLYGLNLTSLAITHCNLTAVPYLAVRHLVYLRFLNLSYNPIGAIEGSML
HELLRLQELQLVGGQLAVVEPYAFRGLNHLRVLNVSGNQLTTLEESAFHSVGNLETLILD
ANPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIR
DRKAQQVFVDEGHTVQFVCRADGDPPPAILWMSPRKHLVSAKSNGRLTVFPDGTLEVRYA
QVQDNGTYVCIAANAGGNDSMPAHLHVRSYAPDWPHQANKTFAFISNQPGDGDANSTRAS
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGIT
SADAPRKFNMKMI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggggtgcacgggcgcgcccagccccctcctgtcctgctggcagcccatcctg
ctgctggtgctgggctcagtgctgtcgggctcggccacgggctgcccgccgcgctgcgag
tgctcggcccaggagcgcgccgtgctgtgccaccgcaagcgcttcgtggccgtgcccgaa
ggcatccccaccgagacgcggctgctggacctgagcaagaaccgcatcaagaccctgaac
caggatgagttcgccggcttcccgcacctggaggagctcgagctgaacgagaacgtggtg
agcgccgtggagcccggcgccttcaacaacctcttcaacctgcggacgctggggctgcgc
agcaaccgcctgaagctcatcccgctgggcgtcttcacggggctcagcaacctgacgcgg
ctggacatcagcgagaacaagatcgtcatcctgctggactacatgttccaggacctgtac
aacctccgctccctggaggtcggggacaacgacctggtctacatctcccaccgcgccttc
agcggcctcaacagcctggagaagctcacgctggagaaatgcaacctcacgtccatcccc
accgaggccctgtctcacctgcacggcctcatcgtcctccgcctccgccatctcaacatc
aacgccatccgcgattactcctttaagcggctctaccgcctcaaggtcctggagatctcg
cactggccctacctggacaccatgacccccaactgcctgtacggcctcaacctcacgtcc
ctggccatcacccactgcaacctcaccgccgtcccctacctggcggtgcgccatctggtc
tacctgcgcttcctgaacctctcctacaaccccatcggcgccatcgagggctccatgctg
cacgagctgctgcggctgcaggagctccagctggtgggcggccagctggccgtggtggag
ccctacgccttccgcggcctcaaccacctgcgcgtgctcaacgtgtccggcaaccagctg
accacgctggaggagtcggccttccactcggtgggcaacctggagaccctcatcctcgac
gccaacccgctggcctgcgactgccggctgctgtgggtcttccggcggcgctggagactc
aacttcaaccggcagcagcccacgtgcgccacgcccgagttcgtgcaggggaaggagttc
aaggacttccccgacgtgctgctgcccaactacttcacctgccgccgcgcccgcatccgg
gaccgcaaggcgcagcaggtgttcgtggacgagggccacaccgtgcagttcgtgtgccgc
gccgacggcgacccgccgcccgccatcctgtggatgtcgccccgcaagcacctggtgtca
gccaagagcaacgggcggctcacggtcttccccgacgggacgctggaggtgcgctacgcg
caggtgcaggacaacggcacgtacgtgtgcatcgcggccaacgcgggcggcaacgactcg
atgcccgcgcacctgcacgtgcgcagctacgcgcccgactggccgcaccaggccaacaag
acgttcgccttcatctccaaccagcccggcgacggcgacgccaacagcacccgcgccagc
gtgcctttccccttcgacatcaagaccctcatcatcgccaccaccatgggcttcatctcc
ttcctgggcgtcgtcctcttctgcctggtgctgctcttcctctggagccggggcaagggg
aacacgaagcacaacatcgagatcgagtacgtgccccgcaagtccgacgcgggcatcacc
tcggccgacgcgccccgcaagttcaacatgaagatgatctga
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