KEGG   Dipodomys ordii (Ord's kangaroo rat): 105986071
Entry
105986071         CDS       T07834                                 
Symbol
Col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04151  PI3K-Akt signaling pathway
dord04510  Focal adhesion
dord04512  ECM-receptor interaction
dord04820  Cytoskeleton in muscle cells
dord04974  Protein digestion and absorption
dord05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:dord00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    105986071 (Col9a2)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    105986071 (Col9a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    105986071 (Col9a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    105986071 (Col9a2)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    105986071 (Col9a2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    105986071 (Col9a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:dord00535]
    105986071 (Col9a2)
Proteoglycans [BR:dord00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   105986071 (Col9a2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 105986071
NCBI-ProteinID: XP_012872265
Ensembl: ENSDORG00000014027
UniProt: A0A1S3F7M5
LinkDB
Position
Unknown
AA seq 688 aa
MATPAAPRSLLLLLQVLGLVLAQIRGPPGERGPPGPPGPPGVPGSDGIDGDKGPPGKAGP
PGSKGEPGKPGPDGPDGKPGIDGLMGAKGEPGPMGTPGVKGQPGLPGPPGLPGPGFAGPP
GPPGPIGLPGEIGVPGPKGDPGPEGPAGPPGPPGKPGRSGTIQGLEGSADFLCPTNCPAG
VKGPPGLQGVKGHPGKRGILGDTGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGVAG
PKGETGPRGYKGMVGSIGAAGLLGEEGPRGPPGRTGEKGDVGSQGVRGPQGITGPKGATG
PPGIDGKDGTPGIPGTKGSAGQAGRPGSQGHQGLAGVPGQPGTKGGPGDKGEPGQQGLPG
FSGPPGKEGEPGPRGEIGPQGIMGQKGDQGERGPVGQPGPQGQQGPKGEQGPPGIPGPQG
LPGIKGDKGSPGKTGPRGGVGDPGVAGLPGEKGDKGESGEPGPKGQQGIRGEPGYPGPSG
DAGAPGVQGYPGLPGPRGQAGNRGLPGHPGRQGVPGRDASDQHIIDVALKMMQEQLAEVA
VSAKREVLGAAGMMGPPGPPGPPGYPGKQGPQGHPGPRGIPGIVGAVGQIGNTGPKGRRG
EKGDQGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLP
GFCEPAACLGASAYASARLTEPGSIKGP
NT seq 2067 nt   +upstreamnt  +downstreamnt
atggccacgccggccgccccccgcagcctgctgctgctcctccaagtgcttgggctcgtc
ctggcgcagatcagaggtcctccgggagaacgggggcctccgggacccccaggaccgccg
ggagtgcctggttcggatggcatagacggtgacaaggggccccctgggaaagctggccct
ccgggatccaaaggagagcctggcaaaccggggcctgatgggcccgatgggaagccgggc
attgacggattaatgggagccaagggggagcctgggcccatgggaactcctggagtcaag
ggtcagcccgggcttccagggccccctggtctgccgggtcctggttttgctggacctcct
ggaccacctggacctattggtcttcctggtgaaattggagtcccaggccccaagggggat
ccaggaccagagggaccagcaggacccccaggtcctcctgggaaaccggggcgctcagga
accatccaaggcttggaaggcagtgcagatttcctgtgtccaaccaactgtccagcaggt
gtgaaaggtcctccagggctacagggagtcaaggggcatccaggcaaacgtgggattctg
ggtgatactggccgtcaggggaagccgggccccaagggagatgtaggtgcctctggagaa
caaggcatccctggaccgccgggaccccaaggcatcaggggttacccaggagtagcagga
cccaaaggagagaccggtcctcgtgggtacaaaggcatggtgggctccatcggtgctgcc
gggttactgggtgaggaaggtccaaggggaccaccaggccgaactggggagaagggtgac
gtgggtagccaaggtgttcgaggaccgcaagggataacaggcccaaagggggcgactggt
cctccaggaatcgatggcaaggatgggactccaggcatacctggcaccaagggcagtgca
ggccaggcagggcggccaggaagccagggccaccagggcctggcgggtgtgccgggccag
cctgggacaaaaggaggccctggagacaagggtgagccgggccagcagggcctccctgga
ttctctggtccccctggaaaggagggagagccggggcctcgaggagaaattggtccccag
ggcattatgggacagaagggtgaccagggtgagaggggcccagtgggacagccaggtcct
caaggacaacagggcccaaagggggagcagggccccccaggaattccaggacctcaaggc
ttaccaggcatcaaaggggacaagggctcaccagggaagactgggccccgtggtggagtg
ggtgacccaggcgtagcaggcctccctggagagaaaggggataagggcgagtctggagag
ccagggcccaaagggcagcaaggaatccgaggagagccaggctaccccggccccagcggg
gatgcaggcgccccaggtgtgcaggggtacccagggctgcctggccctcgaggacaggct
ggaaaccgaggcttgccaggccatccgggaagacagggtgtgccgggccgagatgccagt
gaccagcacatcatagacgtggcgctgaagatgatgcaggagcaactggcagaggtggct
gtgagtgccaagcgggaagtcctgggtgcagctggcatgatgggtcccccgggacctcct
gggcctcctggatacccaggcaagcaaggacctcaagggcaccctggcccccggggcatt
cctggcatcgtgggagctgtgggtcagattggcaacacagggcccaaaggaaggcgtggc
gagaagggtgatcaaggagaagtaggacgtgggcaccccgggatgccagggcccccaggg
atcccaggacttcctggcaggcctggccaggcaatcaacggcaaagatggagaccgaggg
tccccaggggctccaggagaggcaggccgacctggcctgccaggccctgtggggctgcct
ggcttctgtgagcctgcagcctgccttggagcttcagcatatgcctctgcccgtctcaca
gagcctggatccatcaaggggccatga

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