Dipodomys ordii (Ord's kangaroo rat): 105986258
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Entry
105986258 CDS
T07834
Name
(RefSeq) LOW QUALITY PROTEIN: crooked neck-like protein 1
KO
K12869
crooked neck
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105986258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
105986258
03036 Chromosome and associated proteins [BR:
dord03036
]
105986258
Spliceosome [BR:
dord03041
]
Complex B
Other components
Prp19-related factors
105986258
Complex C
105986258
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
105986258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_19
TPR_17
NRDE-2
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
105986258
NCBI-ProteinID:
XP_012872520
UniProt:
A0A1S3F8C7
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MGSSVKSKKCLFSCPFYTNTDSKKGKESLAVPNINDTTVLKPVAGRHSLNYRNIILWLKY
AEMEMKNRQANHARNVWDRAITALPRVSQFWYKYTYMEELLGNMAGPRQVFERWMEWQPE
EQAWHSYINFELRYKEVEQARTIYERFVLVHPRVKNWIKYDHSEEKHAYFAHARKVYERA
VEFFREEHMDEHLYVAFAKFEENQREFERAQVIYKYALDRIPTHEAQELFKNYTIFEKKF
GDRRGFEAIIVSKCRFQYEEEVRASPHNYDAWFDYLRLLESTAEAETVREXYERAIANVP
PIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHQEFTFAXMWLYYAQF
EIRQRNLSSARRTLGTSIGKCPKRKLFRGYIELEVKIXEFDRCLKLYAKLLEFAPENCTS
WIKFAELETILGDLERARAIYELAISQPRLDMPEVLWKSYIDFEMEQGEIERTRNLYRQL
LQQTQHVKIWISLAHFELSAGKEGSVSKCRQIYEEANKTMRNCEEKEARLMLLQFWRSFA
DEFGTVSDKERVDTLMPEKVKKRRKVGTDDGSDAGWEEYCDYIFPEDEATSQPNLKLLAM
AKLWKKQQHPDSGCFL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatctgtcaagagtaaaaaatgcttattctcctgccccttctataccaacact
gactccaagaaaggcaaagaatctctggcggtccccaatatcaatgacaccaccgtcctg
aaacctgttgctgggaggcacagcctgaactatagaaatatcatcctctggctgaaatat
gcagaaatggaaatgaagaatcgccaggccaaccatgcccgaaatgtgtgggaccgtgcc
atcacagcactgccacgagtcagccagttctggtacaagtacacatacatggaagagctg
ttggggaacatggccggtccccggcaggtgtttgagcgctggatggaatggcagcccgag
gagcaagcctggcactcctacattaactttgaattgagatacaaagaggtggagcaggca
cggaccatttacgaacgctttgttcttgtgcacccgcgggtcaagaactggatcaaatat
gaccactctgaagaaaaacatgcttattttgcccatgcacggaaagtgtatgagagagct
gttgagttcttcagagaggaacatatggatgaacacctctatgttgcctttgccaaattt
gaggaaaaccagagagaatttgagagggcccaggtcatctacaagtatgccttggacaga
atcccaacacatgaggctcaggagctcttcaaaaactataccatctttgagaagaagttt
ggtgataggcggggttttgaagctatcattgtgagcaaatgcagattccagtatgaagag
gaagtgagggccagtcctcacaattatgatgcatggtttgattacttgcgcttactggaa
agcactgcagaagctgaaacagtgcgagagntttatgagagagccattgccaatgtcccg
cccattcaggagaagagacactggaagcgttacatctacctctggatcaactatgcactc
tatgaagaattggaggcaaaggatcctgagaggacaaggcaggtgtatcaagcctctttg
gaattaattcctcatcaagagttcacatttgcctagatgtggctctattatgcacaattt
gaaataagacagagaaatttatcatctgccagaagaactttgggaacttccataggcaag
tgcccaaagaggaagttatttagaggctacatagaactggaagtgaagatttgagaattt
gacagatgcctgaagctttatgcaaagctgttggaatttgcacctgaaaattgtacctcc
tggattaagtttgcagaattagagacaatccttggtgatctggagagagccagggcaatc
tatgagttagccatcagccagcctcgcttagacatgccagaggtgctttggaaatcctac
atcgactttgagatggaacagggagaaattgagagaacacgaaatctttaccgacagttg
ctccaacagacacagcatgtcaagatatggatcagtttggctcactttgagttgtctgca
ggaaaagaaggaagtgtgtctaaatgcagacagatttatgaagaggctaacaaaaccatg
cggaactgtgaagaaaaggaagcgaggcttatgctgctgcaattttggagaagctttgcg
gatgaatttggaacagtttcagataaggagagagtagacacactcatgccagagaaagtg
aagaagagaagaaaggttgggactgatgacgggtctgatgcaggctgggaagaatactgt
gactatatctttccagaagatgaagctaccagccaacctaacctcaaacttctggctatg
gctaaactttggaagaaacaacagcatcctgactcaggatgctttctctaa
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