Dipodomys ordii (Ord's kangaroo rat): 105987542
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Entry
105987542 CDS
T07834
Symbol
Ddx23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105987542 (Ddx23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
105987542 (Ddx23)
Enzymes [BR:
dord01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105987542 (Ddx23)
Spliceosome [BR:
dord03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105987542 (Ddx23)
Complex C
U5 SnRNP specific factors
105987542 (Ddx23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
105987542
NCBI-ProteinID:
XP_012874272
Ensembl:
ENSDORG00000012659
UniProt:
A0A1S3FE74
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MAGELADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSR
SRSRSKSTERDRRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRK
DRDSKKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQE
VEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREE
KDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLG
RGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQK
KLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ
AIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL
AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVL
SRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYR
QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE
QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA
TDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK
QAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagctggctgacaaaaaggaccgagatgcatcaccctccaaagaggaaagg
aagcgatcgcgtactcctgacagagagcgggatagggacagggaccggaagtcttcccca
tctaaagataggaagcggcatcgttcaagggatagacgtcgaggaggtagccgttcccgt
tcccggtctcgttccaagtctacagaaagagatcggaggcacaaagaacgtgaacgagat
aaagaacgggatcggaataagaaggacagagatcgagacaaagatggacatagacgggac
aaggaccggaagcgatccagcttatctcctggtcgaggaaaagattttaaatctcggaag
gacagagactctaagaaggatgaagaggatgaacatggtgataaaaagcctaaggcccag
ccattatccttggaggaactgctggccaagaaaaaggctgaggaagaagctgaggctaag
cccaagttcctctccaaagcagagcgggaagctgaagctctaaagcggcgacagcaggag
gtagaggagcggcagaggatgctggaggaagagaggaagaaaaggaaacagttccaagac
ttgggcaggaagatgcttgaagatcctcaggagcgggagcgtcgagaacgcagggagagg
atggagcgggagaccaatggaaatgaggatgaggaagggcggcagaagatccgtgaagag
aaggataagagcaaggaactgcatgccattaaggaacgttacctgggtggcatcaaaaag
cggcgccgaacgaggcatctcaatgaccgcaagtttgtctttgagtgggatgcatctgag
gatacttccatcgactataatcccttgtacaaggaacggcaccaggtgcagttgttaggg
cgaggcttcattgctggcattgacctaaagcaacagaaacgagagcagtcacgtttctat
ggagacctaatggagaagaggagaaccctggaagaaaaggagcaagaagaagcaagactc
cgtaagcttcgtaagaaggaagccaagcagcgctgggatgatcgccattggtcccagaag
aagttagatgagatgacagacagggattggcggatcttccgtgaggactatagcatcacc
accaaaggtgggaagattcccaatcccatccgatcctggaaagactcttctctgccccca
cacatcctggaggtcatcgataagtgtggctacaaggaaccaacacctatccagcgtcag
gcgattcccattggtctacagaatcgtgacatcatcggtgtggctgagactggcagtggc
aagacagcagccttccttattccattgctggtctggatcaccacgctccccaaaattgac
aggatcgaagagtcagatcagggcccttatgccatcatcctggctcccacccgtgagctg
gctcagcagattgaggaagagaccatcaagtttgggaagccactaggcatccgcactgtg
gctgtcattggtggcatctccagagaagaccaaggcttcagactccgaatgggttgtgag
attgtgatcgccaccccaggacgtctcattgatgtgctggagaatcgctacctggtgctg
agccgctgtacctatgtggttctggatgaagcagacaggatgattgacatgggctttgag
ccagatgtccagaagattctggagcacatgcctgtcagcaaccagaagccagacacagat
gaggctgaggaccctgagaaaatgttggccaactttgagtcaggaaaacataagtatcgc
caaacagtcatgttcacagccaccatgcccccagcagtggagcgtctagccaggagctat
cttcgacgacccgccgtggtatacatcggctctgcaggcaagccccatgaacgtgtggaa
cagaaggtcttcctcatgtcagagtcagaaaagaggaaaaagctgctggccatcttggaa
caaggctttgatccacccatcatcatttttgtcaaccagaagaagggttgtgatgtgttg
gccaagtccctggagaagatggggtacaatgcttgtaccctgcatggtggaaaaggccag
gaacagcgagagtttgcactgtccaacctcaaggctggagccaaggatattttggtggct
acagatgtggctggtcgtggtattgatatccaagatgtatctatggttgtcaactatgac
atggccaaaaatattgaagattatatccaccgcattggccgcactggacgagcaggcaag
agtggggtggccatcaccttccttaccaaggaggactcagctgtgttctacgaactgaag
caagccatcctggagagcccagtgtcttcttgccccccagagctagccaaccaccctgat
gcccagcataaaccgggcaccatcctcaccaagaagcgccgggaagagaccatctttgct
tga
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integrated database retrieval system
