Dipodomys ordii (Ord's kangaroo rat): 105990884
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Entry
105990884 CDS
T07834
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03430
Mismatch repair
dord03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105990884 (Pms2)
03460 Fanconi anemia pathway
105990884 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dord03400
]
105990884 (Pms2)
DNA repair and recombination proteins [BR:
dord03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105990884 (Pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
HATPase_c
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
105990884
NCBI-ProteinID:
XP_012878853
UniProt:
A0A1S3FQL7
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MELAAGSSTELAKAIKPIDGKSVHQICSGQVVLSLSTAVKELVENSVDAGATSIDLRLKD
YGVDLIEVSDNGCGVEEGNFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSNA
EEEYAKMVQVLQAYCIISAGVRVSCTNQLGQGKRQPVVCTSGGSSVKENIGSVFGQKQLQ
SLIPFIQLPPSDSVCEEYGLSCSEALHNLFYISGFISRCTHGVGRSATDRQFFFINHRPC
DPAKVCNLIKMRGTEVETPMPDSPPSSSTQEEDKRSVSISRLREAFSLRHPAETKSPGPR
TPELRWNSPIQKKRVPSSSSNPASGRSLQGPLEEVVTPKDSDGRGDRVEVGKDSGYTSTS
AAPEEGFSPREVGSSSSDHAQSSPEDRFSQGDMDSGENLPELDHPPSAGESGKEKDGPCQ
LLPPQTHLSSSSAKRFKKEIPSNTNTPPKSATTENASAAQVDVAVTISKKIVLLTFSMSS
LATRIKQLNCQRQPRESQPNYRKFRARICPGENQAAEDELRKEISKSMFADMEVLGQFNL
GFIITKLKEDIFLVDQHAADEKYNFEMLQRHTVLQAQRLIAPQALNLTAVNEAILIENLE
IFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSESPGVMCRPSRVR
QMFASRACRKSVMIGTALNTSEMKKVIAHMGEMDHPWNCPHGRPTMRHIANLDVISQN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgccgcgggatcgagtacagagcttgcgaaagccatcaaacctatcgatggg
aagtcagttcatcagatttgttctgggcaagtggtcctgagtttaagtactgctgtaaag
gagttggttgaaaatagtgtggatgctggtgccactagtattgatctcaggcttaaagat
tatggggtggatctcattgaagtttcagacaacggatgtggggtagaggaaggaaacttt
gaaggcttagctctgaaacatcatacttctaagattcaagagtttgctgacctcacccag
gttgaaacttttggctttcggggagaagctttgagctcactctgtgcactgagtaatgca
gaggaggagtatgccaaaatggtccaggtgttacaggcatactgtatcatttcagcaggt
gtccgagtaagttgtaccaatcagcttggacaaggaaaacggcagcctgtggtttgcact
agtggaggctccagtgtcaaagagaatattggctctgtgttcgggcagaagcagctacaa
agcctcattcctttcattcagctgccccctagtgactctgtctgtgaagagtatggcctt
agctgttccgaggcgctgcacaatctgttttacatctccggcttcatctcccgctgcacg
cacggcgttgggaggagtgccactgaccggcaattctttttcatcaatcatcggccttgt
gacccagcaaaggtatgtaacttgataaagatgcgtgggacggaagtggaaacacctatg
ccagacagtcctccttcgtctagcactcaggaagaagacaaaaggtctgtgtccatttcc
aggctgagagaggccttttctcttcgtcatcctgcagagaccaaatctccaggcccaagg
actcctgaactgagatggaattctccaatacagaaaaagagggtaccctctagttcctcc
aatcctgcctctggcagaagcctgcagggccctctggaagaggtggtgactcccaaggac
tcggatggccgtggggacagagtggaagtggggaaagactcggggtacaccagtacatca
gctgccccagaggaagggttcagcccccgggaagtgggcagtagcagtagtgaccatgca
cagagctccccagaagacagattttcacaaggagacatggactctggtgagaatctacct
gaactggaccatcccccttcagctggggagtcggggaaggaaaaagatggcccctgtcaa
cttctgcctcctcagacacatctctcctcctccagtgctaagcgatttaaaaaagaaatt
ccctcaaataccaacactcccccaaagtcagctaccactgagaatgcctcagcagcccaa
gtggatgtggctgtgacaattagtaagaaaatagtgctcctcaccttttctatgagctct
ttagctacacgaataaagcagttgaattgccaaagacaaccaagggaaagccaaccgaat
tacaggaaattcagggcaaggatctgtccaggagaaaaccaagcagcagaagatgaacta
agaaaagagataagtaaatcaatgtttgcagacatggaggtgcttggtcagtttaacttg
gggttcataataaccaagctgaaggaggacatcttcctggtggaccagcatgcagctgat
gagaagtacaacttcgagatgctgcagcgtcacacagtactccaagcacagaggctcatt
gcacctcaggctctcaacttaactgctgtcaatgaagctatcctgatagaaaatctggaa
atattcagaaagaatggctttgattttgtcattgatgaagatgctccagtcactgaaaga
gctaaactgatttccttgccaactagtaagaactggacttttggaccccaagatatagat
gagctcatcttcatgctgagtgagagcccgggggtcatgtgccggccctcccgagtcagg
cagatgtttgcctcgagagcctgtcggaaatctgtgatgattggaacagctcttaacacc
agcgagatgaagaaggtcatcgcccacatgggtgagatggaccacccctggaactgcccc
cacggaaggccaaccatgaggcacattgccaatctggatgtcatttctcaaaactga
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