Dipodomys ordii (Ord's kangaroo rat): 105997142
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Entry
105997142 CDS
T07834
Symbol
Trpc4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord04360
Axon guidance
dord04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
105997142 (Trpc4)
09158 Development and regeneration
04360 Axon guidance
105997142 (Trpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dord04040
]
105997142 (Trpc4)
Ion channels [BR:
dord04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105997142 (Trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
105997142
NCBI-ProteinID:
XP_012886915
Ensembl:
ENSDORG00000009242
UniProt:
A0A1S3GDY4
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKSYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSVFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLVKWIWTHLCKKKMRRKPESFGTIGVRTQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTIQSASATKESSNSA
DSDEKSDSEGHGKDKKKNLSLFDLTTLIHPRSAAIASERRTISNGSALAVQGPPREKQRK
VNFVADIKHFGLFHRRPKQSTAEPTTNPIFSVSEEVARQQAAAGPSESGIALGSRGLGAR
GDPNLPGLSEQCVLVDHRERNSDSLGVQMSKRVCAFTSEKVVVEDTVPIIPKEKHARDED
ASLDYDLHLKDTVSHEDYVTTRL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctactacaaaagaaacgtgaatgccccttatcgagaccgcattcctcta
aggatagtccgagcagaatctgaactttctccctcagaaaaatcctacctgaacgcagtg
gaaaagggagactatgcaagcgtgaagaagtccctagaggaagctgagatttattttaaa
atcaatattaactgcattgatcctcttggaagaactgctcttctcatagcaattgaaaat
gagaacttggagctcattgaactgctcttaagcttcaatgtctacgtgggagatgctttg
ctacatgcaatcagaaaagaggtggtgggagccgttgagctgttactgaaccacaaaaag
ccaagtggagaaaaacaggtacctcccatactcctggataagcagttctccgaattcaca
ccggacattacaccaatcatcttggcagctcatacaaataattacgagataataaaactt
ttggtccaaaaaggtgtttcagtgccccgaccccatgaggtccgctgtaattgcgtggaa
tgcgtctccagttcagacgtggacagcctccgtcattcacgatcccgcctcaatatctac
aaggccttggccagtccctctctcatcgccctgtccagtgaagaccctttcctcacagcc
tttcaattaagttgggagcttcaagaactgagcaaggtggaaaatgagttcaagtccgag
tatgaggagctgtccagacagtgcaaacaatttgccaaggatctgttggatcagacaaga
agctccagagaactggaaatcattcttaattaccgagatgacaatagtctgattgaagaa
caaagtggaaatgatcttgcaagactgaaattagccattaagtaccgtcaaaaagagttc
gtggcccagcccaattgtcaacagcttctcgcctctcgctggtacgatgagttcccaggc
tggaggaggagacactgggcagtgaagatggtgacgtgtttcataataggactgcttttc
cccgtcttctctgtgtgctacctgatagctcctaaaagcccacttggactgttcatcaga
aagccatttatcaagtttatctgccacacagcctcctatttgacctttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagaaattaaacag
atgtgggatggtggccttcaagactatatccatgattggtggaatctaatggattttgtg
atgaactccttatatttagcaacaatttctttgaagatcgttgcatttgtaaagtacagt
gctcttaatccacgagagtcatgggacatgtggcaccccactctggtggctgaggcttta
tttgctattgcaaatatcttcagttccctacgtctgatctcattgttcacggcaaattct
cacctgggacctctacaaatatctctgggaagaatgcttctggacattttgaagttcctc
ttcatctactgccttgtgttgctagcatttgcaaatggcttgaatcaattgtacttttat
tatgaagaaacgaagggcttaagctgcaaaggcatacggtgtgaaaaacagaataatgca
ttttccacgttatttgagacactgcaatctctcttttggtcagtatttgggctcatcaat
ttatatgtgaccaatgtcaaagcacagcatgaattcactgagtttgtgggcgccaccatg
tttgggacatacaatgtcatctctctggttgtcttactcaatatgttaatagcaatgatg
aacaattcttaccaactaattgctgaccatgcagatatagaatggaaatttgcacgaaca
aagctgtggatgagctactttgaagaaggaggtactctgcctacgccttttaatgtcatt
ccaagccctaagtccctgtggtacctggtcaaatggatatggacgcacctgtgcaagaaa
aagatgagaagaaagccagaaagttttggaacaataggggtaagaacacagcataggcga
gctgctgataatttgagaagacatcaccaatatcaagaagtgatgaggaacctggtgaag
agatatgttgctgccatgattagagatgctaaaacagaagaagggctgacagaagagaat
tttaaggaactaaagcaagacatttctagcttccgctttgaagtcctgggattgttaaga
gggagcaaactatccaccatccaatccgccagcgccaccaaagagtcttccaactccgcg
gactcggacgagaagagtgacagcgaaggtcacggtaaggacaagaaaaagaacctcagc
ctctttgacctgaccaccctaattcatccgaggtccgcagccatcgcgtcggagagacgc
accatcagcaatggctctgctctggcggtgcagggcccacccagggagaagcagaggaaa
gtgaattttgtggctgatatcaaacacttcgggttgtttcacagacgccccaaacaatcc
acggcggagcccacgacaaaccccatcttctcggtttcagaagaagtggcccggcagcag
gcggccgcgggaccctctgagagtggcatcgcgctgggatcgcggggcctcggggccagg
ggggaccccaacctccccggcctcagtgaacagtgtgtgctagtggaccatagggaaagg
aattcggactccttgggtgtgcagatgagcaagagagtgtgtgcgttcacgtccgagaaa
gtcgtggtggaggacacggtgcccatcatccccaaggagaaacacgcgagggatgaggat
gccagcctagactacgacttgcacctcaaggacaccgtcagccacgaagactatgtgacg
accagattgtga
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