Dipodomys ordii (Ord's kangaroo rat): 106001038
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Entry
106001038 CDS
T07834
Name
(RefSeq) LOW QUALITY PROTEIN: crooked neck-like protein 1
KO
K12869
crooked neck
Organism
dord
Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dord00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106001038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dord03041
]
106001038
03036 Chromosome and associated proteins [BR:
dord03036
]
106001038
Spliceosome [BR:
dord03041
]
Complex B
Other components
Prp19-related factors
106001038
Complex C
106001038
Chromosome and associated proteins [BR:
dord03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106001038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
U3_assoc_6
TPR_12
Motif
Other DBs
NCBI-GeneID:
106001038
NCBI-ProteinID:
XP_012891662
UniProt:
A0A1S3GUM8
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MAVSTAVGKLQIPQVAKVKNKAPALMQITAEQLLREAKEXELELLPPPPQQRIADEEEFN
DYKLRKRKAFEDNLRKNRTVIRSWIKYAQWEERLQEIQRARSIYERALDVDYRNITLWLK
HAEMEMRNRQANHARNVWDRAISALPRVSQFWYKYTYMEELLGNMASARQVFERXMEWQP
EEQAWHSYINFELRYKEVERAWTIYERFVLVHPRVKNWIKYAHSEEKHAYFAHAWKVYER
AVEFFGEEHMDEHLYVAFAKFEENQKEFERAQVIYKYALDRIPTHEAQELFKNYTIFEKK
FGDRQGIETIVVSKRRFQYEEEVRASPHNYDAWFDYLRLLESTAEADTVREVYERAIANV
PPIQEKRHWKPYIYLWINYALYEELQAKDPERTRQLYQASLELIPHQEFTFAKMWLYYAQ
FEIRQRNLSSARRALGTSIGRCPKSKLFKGYIELEVKLREFDRCRKLYAKLLEFAPENCT
SWIKFAELETILGDLERARAIYELAISQPCLDMPEVLWKSYIDFEMEQGEIERTXNLYRQ
LLQRTQHVKVWISLAHFELSAGKEGSVSKCRQIYEDANKTMQNCEDQEARLILLQSWRSF
EDEFGTVSDKERVDRLMPEKVKKRRKVRTDDGSDAGWEEYCDYIFSEDEAASQPNLKLLA
MAKLWKKQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccactgcagtcgggaaactgcagatccctcaggtggccaaggtcaaaaac
aaagctccagctctcatgcagatcaccgctgaacaactgctcagggaggccaaagaatga
gagcttgagcttcttccacctccacctcaacagaggattgcagatgaagaagaattcaat
gactacaagctgaggaaaaggaaggcctttgaagataacttaaggaagaaccggactgtg
attaggagctggataaaatacgcacaatgggaagaaaggctccaggaaattcagagggct
cgatccatctatgagcgtgctttagacgtggactatagaaatatcacactctggctgaaa
catgcggaaatggaaatgaggaatcgccaggccaaccatgcccgaaatgtttgggaccgt
gccatatcagcactgccacgagtcagccagttctggtacaagtacacatacatggaagag
ctgttggggaacatggccagtgcccggcaggtgtttgagcggtagatggaatggcagccc
gaggagcaagcctggcactcctacattaactttgaactgagatacaaagaggtggagcgg
gcatggaccatttacgaacgctttgttcttgtgcacccacgggtgaagaactggatcaaa
tatgcccactctgaagaaaaacatgcttattttgcccatgcatggaaagtgtatgagaga
gctgttgagttctttggagaggaacatatggatgaacacctctatgttgcctttgccaaa
tttgaggaaaaccagaaagaatttgagagggcccaggtcatctacaagtatgccttggac
agaatcccaacacatgaggctcaagagctcttcaaaaactataccatctttgagaagaag
tttggggacaggcagggtattgaaactatcgttgtgagcaaacgcagattccagtatgaa
gaggaagtgagggccagtccccacaattatgatgcgtggtttgattacttgcgcttactg
gaaagcactgcagaagctgacacagtgcgagaggtttatgagagagccattgccaacgtc
ccacccattcaggagaagagacactggaagccttacatctacctctggatcaactatgca
ctctatgaagaattgcaggcaaaggatcctgagaggacaaggcagttgtatcaagcctct
ttggaattaattcctcatcaagagttcacatttgccaagatgtggctctattatgcacaa
tttgaaataagacagagaaatttatcatctgccagaagagctttggggacttccataggc
aggtgtccaaagagcaagttatttaaaggctacatagaactggaagtgaagcttcgagaa
tttgacagatgccggaagctttatgcaaagctgttggaatttgcacctgaaaattgtacc
tcctggattaagtttgcagaattagagacaattcttggtgatctggagagagccagggca
atctatgagttagccatcagccagccttgcttagacatgccagaggtgctttggaaatcc
tacatcgactttgagatggaacagggagaaattgagagaacatgaaatctttaccgacag
ttgctccaacggacacagcatgtcaaggtatggatcagtttggctcactttgagttgtct
gcaggaaaagaaggaagtgtgtctaaatgcagacagatttatgaagatgctaacaaaacc
atgcagaactgtgaagatcaggaagcgaggcttattctgctgcaatcttggagaagcttt
gaggatgaatttggaacagtatcagataaggagagagtagacagactcatgccagagaaa
gtgaagaagagaagaaaggttcggactgatgacgggtctgatgcaggctgggaagaatac
tgtgactatatcttttcagaagatgaagctgccagccaacctaacctcaaacttctggct
atggctaaactttggaagaaacaatag
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