Entry |
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Symbol |
Os01g0681400, ATG6A, AUTOPHAGY_ASSOCIATED_GENE_6A
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Name |
(RAP-DB) Similar to Autophagy protein beclin1.
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KO |
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Organism |
dosa Oryza sativa japonica (Japanese rice) (RAPDB)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:dosa00001]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
Os01t0681400-01 (Os01g0681400)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:dosa04131]
Os01t0681400-01 (Os01g0681400)
03029 Mitochondrial biogenesis [BR:dosa03029]
Os01t0681400-01 (Os01g0681400)
Membrane trafficking [BR:dosa04131]
Autophagy
Autophagosome formation proteins
PI3K complex
Os01t0681400-01 (Os01g0681400)
Mitochondrial biogenesis [BR:dosa03029]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
Os01t0681400-01 (Os01g0681400)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
chr01:complement(join(28076064..28076220,28074964..28075313,28074576..28074746,28074092..28074216,28073660..28073708,28072811..28072969,28072648..28072733,28072067..28072138,28071602..28071751,28071122..28071305))
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AA seq |
500 aa
MKAPAAAAAAVGNRAGGVDPSIPRFKCQECHRALVVVGVDSFADKLPAQATSAHASSVHG
SIMGASRMDNSYVVLSKQNKSHGHGIPPRPPSAAAPHIEPNQPTRAMEGSYIVLPPAAAS
IYKTSTSEGGGAQLPPPSINSSSLLPGNSFHSNVTVLKRAFEIATSQTQVEQPMCLDCMR
LLSDKMDKEIEDVNADIKAYEVCLQHLEQESHTVLSDAGFQKEKLKIEEEEKKLNAAIEE
AEKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSFQFQLTSHQEERDAILAKIEVSQVH
LELLKQTNVLNDAFYISHDGVIGTINNFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQY
FTPKFEYRIKIHPMGSYPRVTDIHKNTYELFGPVNLFWSTRFDKAMTWFLTCLQDFAEFA
ISLDKENNVPPEKSLKLPYKIDGDKVGSHTIFLSFNKVENWTKALKYTLCNLKWVLYWFI
GNTSFAPPSGSLCAAQSSKR |
NT seq |
1503 nt +upstreamnt +downstreamnt
atgaaggcccccgccgcggccgcggccgcggtcggcaacagggctggtggggtggatccg
tcgattccgcggttcaagtgccaggagtgccaccgcgcgctcgtcgtcgtcggcgtggat
tccttcgccgataagctcccggctcaggccacctctgcgcatgcatcctctgttcatgga
agtattatgggagctagcaggatggataattcttatgtcgtgctatccaagcaaaacaaa
tctcatggccatggaattcccccacgcccaccaagtgcagcagccccacatatcgaacct
aaccagccaacaagagcgatggagggttcatatatagtgcttccacctgctgctgcttcc
atatacaagacatctacttctgaaggaggtggtgcgcagttgccaccaccaagtatcaat
tccagtagtttgttaccaggaaatagttttcactctaacgtgactgtattaaaacgggca
tttgagattgctacgtcacaaactcaggttgagcagccaatgtgtctggactgtatgagg
ttgctctctgataagatggataaggagattgaagatgttaatgctgacattaaagcttat
gaagtctgtcttcaacatttggagcaggaatcccacactgtcctcagcgatgctggtttt
cagaaggagaaactgaagattgaagaagaagaaaagaagcttaacgccgctattgaagaa
gctgaaaagcaatattcagaaattagttctgagatgaaggatcttgaaataaaatctaaa
gaatttgaagaattggaagaaaggtattggcatgaattcaatagctttcagtttcagttg
acatctcaccaggaagaaagagatgcaattttggccaaaatagaagtttcacaggttcat
ttggaattgctgaagcaaacaaatgttctcaatgatgcattctatatttcacatgatgga
gtaattggaacaataaacaacttccgactcggacgccttcctaatgtacaggttgaatgg
gatgagataaatgctgcttggggtcaggctgctcttcttttgcataccatggctcagtac
ttcaccccaaaatttgagtaccggattaagattcaccctatgggtagctacccaagagtc
acagatatccacaaaaatacatatgaactgtttggtcccgtgaatttattctggagcaca
cgttttgacaaagccatgacatggtttctaacctgcctgcaagattttgctgagttcgct
attagcttggataaagagaacaatgtaccacctgagaagtcattaaagctcccatacaag
attgatggtgacaaggtagggagccacacaatcttcttaagttttaataaagtggagaac
tggacgaaagcactaaaatacacgctgtgcaacttgaagtgggtcctctactggtttatc
ggcaatacgagtttcgcaccaccatctggatctttgtgtgcagcgcaatcatctaagaga
tga |