KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0681400-01
Entry
Os01t0681400-01   CDS       T02163                                 
Symbol
Os01g0681400, ATG6A, AUTOPHAGY_ASSOCIATED_GENE_6A
Name
(RAP-DB) Similar to Autophagy protein beclin1.
  KO
K08334  beclin
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    Os01t0681400-01 (Os01g0681400)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dosa04131]
    Os01t0681400-01 (Os01g0681400)
   03029 Mitochondrial biogenesis [BR:dosa03029]
    Os01t0681400-01 (Os01g0681400)
Membrane trafficking [BR:dosa04131]
 Autophagy
  Autophagosome formation proteins
   PI3K complex
    Os01t0681400-01 (Os01g0681400)
Mitochondrial biogenesis [BR:dosa03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    Os01t0681400-01 (Os01g0681400)
SSDB
Motif
Pfam: APG6 APG6_N Occludin_ELL
Other DBs
RAP-DB: Os01t0681400-01
LinkDB
Position
chr01:complement(join(28076064..28076220,28074964..28075313,28074576..28074746,28074092..28074216,28073660..28073708,28072811..28072969,28072648..28072733,28072067..28072138,28071602..28071751,28071122..28071305))
AA seq 500 aa
MKAPAAAAAAVGNRAGGVDPSIPRFKCQECHRALVVVGVDSFADKLPAQATSAHASSVHG
SIMGASRMDNSYVVLSKQNKSHGHGIPPRPPSAAAPHIEPNQPTRAMEGSYIVLPPAAAS
IYKTSTSEGGGAQLPPPSINSSSLLPGNSFHSNVTVLKRAFEIATSQTQVEQPMCLDCMR
LLSDKMDKEIEDVNADIKAYEVCLQHLEQESHTVLSDAGFQKEKLKIEEEEKKLNAAIEE
AEKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSFQFQLTSHQEERDAILAKIEVSQVH
LELLKQTNVLNDAFYISHDGVIGTINNFRLGRLPNVQVEWDEINAAWGQAALLLHTMAQY
FTPKFEYRIKIHPMGSYPRVTDIHKNTYELFGPVNLFWSTRFDKAMTWFLTCLQDFAEFA
ISLDKENNVPPEKSLKLPYKIDGDKVGSHTIFLSFNKVENWTKALKYTLCNLKWVLYWFI
GNTSFAPPSGSLCAAQSSKR
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgaaggcccccgccgcggccgcggccgcggtcggcaacagggctggtggggtggatccg
tcgattccgcggttcaagtgccaggagtgccaccgcgcgctcgtcgtcgtcggcgtggat
tccttcgccgataagctcccggctcaggccacctctgcgcatgcatcctctgttcatgga
agtattatgggagctagcaggatggataattcttatgtcgtgctatccaagcaaaacaaa
tctcatggccatggaattcccccacgcccaccaagtgcagcagccccacatatcgaacct
aaccagccaacaagagcgatggagggttcatatatagtgcttccacctgctgctgcttcc
atatacaagacatctacttctgaaggaggtggtgcgcagttgccaccaccaagtatcaat
tccagtagtttgttaccaggaaatagttttcactctaacgtgactgtattaaaacgggca
tttgagattgctacgtcacaaactcaggttgagcagccaatgtgtctggactgtatgagg
ttgctctctgataagatggataaggagattgaagatgttaatgctgacattaaagcttat
gaagtctgtcttcaacatttggagcaggaatcccacactgtcctcagcgatgctggtttt
cagaaggagaaactgaagattgaagaagaagaaaagaagcttaacgccgctattgaagaa
gctgaaaagcaatattcagaaattagttctgagatgaaggatcttgaaataaaatctaaa
gaatttgaagaattggaagaaaggtattggcatgaattcaatagctttcagtttcagttg
acatctcaccaggaagaaagagatgcaattttggccaaaatagaagtttcacaggttcat
ttggaattgctgaagcaaacaaatgttctcaatgatgcattctatatttcacatgatgga
gtaattggaacaataaacaacttccgactcggacgccttcctaatgtacaggttgaatgg
gatgagataaatgctgcttggggtcaggctgctcttcttttgcataccatggctcagtac
ttcaccccaaaatttgagtaccggattaagattcaccctatgggtagctacccaagagtc
acagatatccacaaaaatacatatgaactgtttggtcccgtgaatttattctggagcaca
cgttttgacaaagccatgacatggtttctaacctgcctgcaagattttgctgagttcgct
attagcttggataaagagaacaatgtaccacctgagaagtcattaaagctcccatacaag
attgatggtgacaaggtagggagccacacaatcttcttaagttttaataaagtggagaac
tggacgaaagcactaaaatacacgctgtgcaacttgaagtgggtcctctactggtttatc
ggcaatacgagtttcgcaccaccatctggatctttgtgtgcagcgcaatcatctaagaga
tga

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