Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0972900-01
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Entry
Os01t0972900-01 CDS
T02163
Symbol
Os01g0972900
Name
(RAP-DB) Similar to Clone ZZD405 mRNA sequence. (Fragment).
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Os01t0972900-01 (Os01g0972900)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os01t0972900-01 (Os01g0972900)
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Target recognizing subunit
Os01t0972900-01 (Os01g0972900)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
MIOS_WD40
Aldo_ket_red
Motif
Other DBs
RAP-DB:
Os01t0972900-01
LinkDB
All DBs
Position
chr01:join(42949561..42950043,42950152..42950379,42950843..42951022,42951157..42951411,42951493..42951597,42952019..42952081,42952168..42952236,42952313..42952366)
AA seq
478 aa
AA seq
DB search
MATDASPKPAPPRLNVPPAMAGGLRLDPAVASPARLLLDVPKTPSPSKTTYSDRFIPCRS
SSRLHNFALLDRDRASPSSTTDDAPYSRLLRAEIFGPDSPSPAPSSPNTNLFRFKTDHPS
PKSPFAASAAATAGHYDCTAGSAESSTPRKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWS
SQNTLAVGLGNCVYLWSASNCKVTKLCDLGPRDSVCAVHWTREGSYLAIGTSLGDVQIWD
SSRCKRIRNMGGHQTRTGVLAWSSRILSSGSRDKNILQHDIRVPSDYISKFSGHRSEVCG
LKWSHDDRELASGGNDNQLLVWNQRSQQPILRLTEHTAAVKAIAWSPHQQGLLASGGGTA
DRCIRFWNTVNGNMLNSVDTGSQVCNLAWCKNVNELVSTHGYSQNQIMVWKYPSMSKVAT
LTGHTLRVLYLAMSPDGQTIVTGAGDETLRFWNIFPSMKTQAPVRDIGLWSFSRSHIR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggacgcgtcccccaagccggcgccgccgcgcctcaacgtgccgccggcgatg
gcgggggggctccgcctcgatcccgccgtcgcctccccggcccgcctcctcctcgacgtc
cccaagacgccatccccttccaagaccacgtacagcgaccgcttcatcccctgccgctcc
tcctcccgcctccacaacttcgccctcctcgaccgcgaccgcgcctccccctcctccacc
accgacgacgccccctactcccgcctcctccgcgccgagatcttcggcccggactccccc
tccccggctccctcctcccccaacaccaacctcttccgcttcaagaccgaccacccctcg
cccaaatcgcccttcgccgcctccgccgccgccaccgccggccactacgactgcaccgcc
ggctccgctgaatcctccacgccgcgcaagccgcccaggaaggtccccaagaccccgcac
aaggtcctggacgcgccgtcgctgcaggacgacttctacctcaatcttgtcgactggtcg
tcgcagaacacgctcgccgtcggcctcgggaattgcgtctacctctggtcggcttccaat
tgcaaggtcaccaagctctgcgatttggggcccagggacagcgtctgcgctgtgcactgg
acccgagaaggctcctatcttgccatcggcaccagccttggcgatgtccagatttgggat
agctctcgctgtaaacggattaggaacatgggaggacaccaaacacggactggtgtatta
gcatggagctcccgaatcttgtcctccggtagcagggacaagaacatattgcagcatgac
atccgtgtcccaagtgactatatcagcaagttctcagggcacagatcagaggtctgtgga
ctgaaatggtcgcacgacgaccgtgagcttgcatccggtggaaatgataatcagctgcta
gtatggaaccaacgttcgcagcagccgatattgaggctgacagaacacacagctgcagtt
aaagcaatagcatggtcaccacatcagcaaggcctcctggcatcaggtggtggaaccgct
gataggtgtatcaggttctggaacacggttaatggaaacatgctgaattcagtggacaca
ggcagccaggtttgtaatcttgcctggtgtaaaaatgtaaatgagcttgtgagcactcat
gggtattcccaaaaccaaatcatggtgtggaagtacccatctatgtcaaaggttgctact
ctaactggacacacgctgcgagtgctttaccttgcaatgtcacctgatggacagacaata
gtaacaggagccggggatgaaaccctcagattttggaatatttttccttcaatgaagaca
caggctcctgttcgtgatattgggctctggtcattctcgagaagccacatacggtga
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