KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0142300
Entry
Os02g0142300      CDS       T02163                                 
Name
(GenBank) Similar to Nuclear protein-like
  KO
K12828  splicing factor 3B subunit 1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os02g0142300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dosa03041]
    Os02g0142300
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os02g0142300
Spliceosome [BR:dosa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    Os02g0142300
 Complex B
    Os02g0142300
 Complex C
   U2 SnRNP specific factors
    Os02g0142300
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    Os02g0142300
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N HEAT_MROH2B_C HEAT_EZ TPR_DNAAF5 HEAT TPR_IPO5 Htt_N-HEAT_1 HEAT_ECM29 Cnd1 HEAT_EF3_N HEAT_2 HEAT_GCN1 TPR_IMB1 XMAP215_CLASP_TOG Vac14_Fab1_bd VPS15-like_hel Adaptin_N IFRD UNC45-central
Other DBs
NCBI-ProteinID: BAF07776
RAP-DB: Os02g0142300
UniProt: Q0E412
LinkDB
Position
2
AA seq 745 aa
ELPGGLPFMKPEDYQYFGTLLNEEEGEQLSPEEQKERKIMKLLLKVKNGTPPQRKTALRQ
LTDKAREFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPFVHKILVVI
EPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASA
LGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLESVVEIIEHGLSDEN
QKVRTITALSLAALAEAAAPYGIESFDTVLKPLWKGIRSNRGKVLAAFLKAIGFIIPLMD
ALYASYYTKEVMQILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIWNDILPEFFHHF
WVRRMALDRRNYKQLVETTVEMANKVGVADIVGRIVEDLKDESEPYRRMVMETVEKVVAN
LGASDIDARLEELLIDGILYAFQEQASDDANVMLNGFGAVVNALGQGVKPYLPQICGTIK
WRLNNKSAKVRQQAADLISRIAIVMKHCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGAL
KAIVNVIGMTKMTPLIKNLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMR
ICFELLEMLKAHKKGIRRATVNTFGYIAKAIGLQDVLATLLNYLKVQERQNRVCTTVAIA
IVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLVDDAL
MDRDLVHWQTAASAVKHMALGAKHI
NT seq 2238 nt   +upstreamnt  +downstreamnt
gagttgcctggtgggttgcccttcatgaagccagaggattaccagtactttggaacattg
ctgaatgaggaggagggggagcagctatctccagaagagcagaaggagaggaagatcatg
aagctcctgctcaaggtgaagaatggcacacccccacagcggaagacagcacttcgacag
ctgacagacaaagcaagggaatttggtgctggcccattgttcaacaagattctacccttg
ctcatgcagccaacacttgaggaccaggagcgtcatcttctagtgaaggtcattgacagg
gtactgtataagctggatgagctagtccgtccatttgtgcacaagattcttgtggtcatc
gaaccacttctgattgatgaggactactacgctcgtgttgagggccgggagatcatctca
aatcttagcaaagctgctggtcttgctactatgattgccgccatgagaccagatattgat
aacattgatgagtatgtgagaaataccactgctagagcatttagtgtggtggcttctgct
ttgggtatccctgctctcctgccattcttaaaggctgtctgtcagagtaagaagtcttgg
caagctcggcacactggtatcaagattgttcagcagattgctattcttatgggctgcgct
gttctgccacatctcgagtccgtagtcgagatcattgagcatggtcttagtgacgagaac
cagaaagtgaggacaatcactgccctttctcttgctgcacttgctgaggctgctgcacca
tatggtatagaaagttttgatactgttttgaagcctctgtggaagggtatcagatctaac
cgtggaaaggttcttgctgccttcttgaaagcaattggttttatcatccctcttatggat
gcgctgtatgccagttactacacaaaggaggtcatgcaaatcctgattagggagttccag
tcaccagatgaagagatgaaaaagattgtcctgaaggttgttaaacagtgtgtcagtaca
gagggtgtagaggctgattatatctggaatgacatccttcctgaatttttccatcacttc
tgggttaggagaatggctctggaccgcaggaactataagcagcttgtggaaacaacggta
gagatggcaaataaggttggagttgctgatattgttgggaggattgttgaggatctgaaa
gatgaaagcgaaccttacaggagaatggtaatggaaacagttgagaaggtagtggctaat
ttgggtgcttcagatattgatgctcgtttggaggagctgcttattgatggcatcttgtat
gctttccaagagcaggcaagtgacgatgcaaatgtcatgcttaatggttttggggctgtt
gtcaatgcactgggacagggggtcaagccttaccttcctcagatttgtggtaccattaag
tggcggttgaacaacaagagtgcaaaagttaggcagcaagctgctgatctgatctcaagg
atagccattgtaatgaaacattgccaggaggagcagcttatgggtcacttgggtgttgtg
ctgtatgagtatttgggagaggagtaccctgaggtgttgggttcaattcttggagcactg
aaagctattgtgaatgtcattggcatgactaagatgacaccgctgatcaagaatcttctt
cctcgactgactcctattttgaagaacaggcatgaaaaggtccaggagaactgcattgat
ctagttggtaggattgctgatcgtggagcagaatttgtgcctgctagggagtggatgagg
atttgttttgagcttcttgaaatgttgaaggctcacaagaagggtattagaagagccacc
gtgaacacatttggttatattgcgaaggctattgggctgcaggatgtgttggctactctg
ttgaattacttgaaggtgcaggaacggcaaaaccgtgtctgcacgactgtcgcgattgcc
attgttgctgaaacctgctcaccttttacagttctgcctgccctgatgaatgagtaccga
gtcccagaactcaatgttcagaatggtgtcctgaagtctctctctttcctctttgagtat
attggtgagatgggcaaggattacatatatgctgttactcccttggttgacgatgctcta
atggacagagatcttgttcactggcaaactgctgcctctgctgtgaagcacatggctctt
ggtgccaaacatatttga

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