Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0152800-01
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Entry
Os02t0152800-01 CDS
T02163
Symbol
Os02g0152800
Name
(RAP-DB) RNA polymerase Rpb1, domain 1 containing protein.
KO
K16251
DNA-directed RNA polymerase V subunit 1 [EC:
2.7.7.6
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Os02t0152800-01 (Os02g0152800)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os02t0152800-01 (Os02g0152800)
Enzymes [BR:
dosa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Os02t0152800-01 (Os02g0152800)
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol IV and V specific subunits
Os02t0152800-01 (Os02g0152800)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
Motif
Other DBs
RAP-DB:
Os02t0152800-01
LinkDB
All DBs
Position
chr02:complement(join(2917864..2917947,2916792..2916918,2916567..2916682,2916419..2916475,2915583..2915753,2915330..2915488,2915086..2915241,2913665..2914259))
AA seq
488 aa
AA seq
DB search
MEEDQSAIPVAEGAIKSIKLSLSTEDEIRTYSINDCPVTHPSQLGNPFLGLPLETGKCES
CGASENGKCEGHFGYIELPVPIYHPCHVTELRQILNVVCLKCLRVKKGKVKQTEGKDNTS
ALSCYYCRDLPALSLKEIKTADGAFRLELKMPPRKFMTEGSWNFLDKYGFHHGGTSHCRT
LLPEEALNILKKIPEETKRKLAARGYIAQSGYVMKYLPVPPNCLYIPEFTDGQSIMSYDI
SISLLKKVLQKIEQIKKSRAGSPNFESHEVESCDLQLSIAQYIHLRGTTRGPQDNTKRFA
ISTDPSALSTKQWLEKMRTLFISKGSGFSSRSVLTGDPYIGVDVIGLPSEVAKRITFEEQ
VTDINLNRLQEIVDKGLCLTYRDGQATYAITVGSKGHTTLKVGQTISRRIVDGDVVFLNR
PPSTHKHSLQAFRVYVHEDHTVKINPLICAPFAADFDGDCVHIYYPQSLAAKAEALELFS
VEKQLTSS
NT seq
1465 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaccagtcagcaattccggttgctgaaggtgccatcaagagcatcaagctt
agcctatccactgaggatgagattcgtacttattctataaatgactgtcctgtcactcat
cctagtcagctcggaaatcccttccttgggttacctttggagacaggaaaatgcgagtcc
tgtggtgcctcagaaaatggaaaatgcgaagggcatttcgggtacattgagctgcctgtg
cctatatatcacccttgccatgtaacggaactgaggcagatattaaatgtggtatgtttg
aaatgcctccgcgtcaagaaaggaaaggtcaaacagacagagggaaaggataacacatca
gcattgtcatgctactattgtcgggatcttccggcattatctttgaaagaaatcaaaaca
gcagatggtgcatttcgtttagagttgaaaatgcctcctaggaaattcatgacagaaggc
tcatggaacttccttgacaagtatggatttcaccatggtggaacctcccactgcaggacc
ttgctcccggaagaggctctcaatatattgaagaaaattcctgaagaaacgaagaggaaa
ctagctgctcgtggttacattgctcaatctggatatgtgatgaaatacctccccgtgcca
ccaaattgtttatacattccagaatttacagatgggcagagcatcatgtcctatgacata
tcaatatctctgctgaagaaggtgcttcagaaaatagagcagataaaaaagtcaagagct
ggatccccaaactttgaatcacatgaagttgaatcatgtgatctacagctctctattgcc
cagtacatacatctaaggggcactacaaggggtcctcaagacaacaccaagagatttgca
atcagtactgatccttctgcgttatcaacaaaacaatggctggagaagatgagaacatta
tttatcagcaaagggtcagggttttcatcacgcagtgtacttactggagatccatatatt
ggagtagatgtgattggactgccttctgaagtggcaaaaagaatcactttcgaagagcag
gtaacagacatcaaccttaacaggttgcaagagattgtggataagggattgtgtttgacc
tacagagatggccaggcaacctatgccatcaccgttggatccaaaggtcacactaccctg
aaagtcggacagactatcagtaggagaattgttgatggggatgttgttttccttaaccgt
ccacccagtacccacaagcattccctccaggcatttcgcgtgtatgtccatgaagaccat
acggtcaagatcaatccgctcatatgcgcaccttttgcagcggactttgacggtgattgt
gtgcacatctattatccacagtcccttgctgcaaaagctgaagcactggagcttttcagt
gtggagaagcagcttaccagttcgc
DBGET
integrated database retrieval system
