Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0262400-01
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Entry
Os03t0262400-01 CDS
T02163
Symbol
Os03g0262400
Name
(RAP-DB) Similar to Eukaryotic translation initiation factor 4E type 3 (eIF4E type 3) (eIF-4E type 3) (mRNA cap-binding protein type 3) (Novel cap-binding protein) (nCBP).
KO
K03259
translation initiation factor 4E
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os03t0262400-01 (Os03g0262400)
03012 Translation factors [BR:
dosa03012
]
Os03t0262400-01 (Os03g0262400)
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Os03t0262400-01 (Os03g0262400)
mRNA cycle factors
Common to processing body (P body) and stress granule
Os03t0262400-01 (Os03g0262400)
Translation factors [BR:
dosa03012
]
Eukaryotic type
Initiation factors
eIF-4
Os03t0262400-01 (Os03g0262400)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IF4E
Motif
Other DBs
RAP-DB:
Os03t0262400-01
LinkDB
All DBs
Position
chr03:complement(join(8600356..8600511,8600106..8600198,8599910..8600014,8599729..8599806,8597541..8597660,8597328..8597459))
AA seq
227 aa
AA seq
DB search
MEPAAEKREAEQEELQQQHDEPAVPSADDDEAEAEENERRNRELKAGFHPLRRRFVLWYT
RRTPGARSQSYEDNIKKIVDFSTVESFWVCYCHLTRPVSLPSPTDLHLFKEGIRPLWEDP
ANRSGGKWIIRFKKTVSGRFWEDLVLVLVGDQLDYSDDVCGVVLSVRFNEDILSVWNRNA
SDHQAVMTLRDSIKRHLKLPHSYLMEYKPHDASLRDNSSYRNTWLRG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggagccggcggcggagaagagggaggccgagcaggaggagctgcagcagcagcacgac
gagcccgccgtcccttccgccgacgacgacgaggctgaggcggaggagaacgagcgccgc
aaccgcgagctcaaggccggcttccatccccttaggcgtagattcgtgctatggtacacg
cgccggactcctggggcgaggtcgcagtcctacgaggacaacatcaagaagatcgtcgac
ttcagcactgttgagtcgttctgggtttgctactgccacctcacgcggccggttagcctg
ccgagccccaccgacctgcatcttttcaaggagggcatccggcccctctgggaggatccc
gcaaataggagcggtggcaagtggatcataaggtttaagaagaccgtctctggtcgtttc
tgggaggatttggtgttggtgctagtgggtgatcaacttgattatagtgatgatgtttgt
ggcgttgtactcagtgttcgtttcaatgaggacattctaagtgtctggaaccgtaatgca
tctgaccaccaggctgtgatgacattaagagattcaattaagaggcatctgaagctgcca
cacagctatctgatggagtacaaaccacatgatgcttcactgcgggataactcatcttac
aggaacacgtggttgagaggataa
DBGET
integrated database retrieval system
