Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0284600-01
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Entry
Os04t0284600-01 CDS
T02163
Symbol
Os04g0284600
Name
(RAP-DB) Similar to TAT-binding protein 1 (Fragment).
KO
K03065
26S proteasome regulatory subunit T5
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
Os04t0284600-01 (Os04g0284600)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
dosa03051
]
Os04t0284600-01 (Os04g0284600)
Proteasome [BR:
dosa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
Os04t0284600-01 (Os04g0284600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
nSTAND3
DUF815
AAA_22
RuvB_N
AAA_2
AAA_7
AAA_14
ATPase
AAA_18
AAA_24
Mg_chelatase
RNA_helicase
IstB_IS21
TniB
Sigma54_activat
AAA_3
AAA_33
AFG1_ATPase
TMF_TATA_bd
TIP49
AAA_28
AAA_11
AAA_19
Sigma54_activ_2
AAA_25
Motif
Other DBs
RAP-DB:
Os04t0284600-01
LinkDB
All DBs
Position
chr04:complement(join(12258490..12258573,12258245..12258334,12257630..12257701,12256246..12256365,12255816..12256007,12255385..12255503,12254803..12254881,12253802..12253921,12253549..12253689,12252814..12252870))
AA seq
357 aa
AA seq
DB search
MPSSAAAAADGGDIEEVDRLKKRIRTLEMEETKLNQHMERVIQGIEANEAYLVGMVLRIM
EKGPEDETAEDDCDVGFHLQRKIIFRPIAGVVYPSKLKPGDLIGVDSTSNEHYCGIGGLE
KQIEELVEAVVLPIIHKNCFQRLGIHPPKGVLLYGPPGTGKTLVAHAFASQTNATFLKLT
GPQLAVKLIGEGARLVRDAFQLAKEKAPCIIFIDEIDAIGSKHFDSGDREVQQTIVELLN
QLDGVGSYESIKVIAATNRPEVLDPAFLRSGRLDQKIEFPHPSEQARVRILEIHSRKMDK
NPDVNFEELACCTDDFNGAQLKAVCFEASMLAFHRDATEVRHEDFVRAIAQVKDGNY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccttcctccgccgcagccgccgccgacggcggcgacatcgaggaggtggaccgcctc
aagaagaggatcaggaccctcgagatggaggagacgaagttgaaccagcatatggaacgc
gtcatccagggaatcgaagcgaacgaggcgtacctcgtcggcatggtcctcaggattatg
gaaaagggcccagaggatgagactgctgaggatgattgtgatgttggctttcatttgcag
cgaaaaattatattccgtcctattgctggggtagtgtaccctagcaaacttaagcctgga
gatttaattggtgttgacagtacatcaaatgaacactactgtggcattggtggtctcgaa
aaacaaattgaggagcttgtggaagcagttgtgttgccaataatccacaagaactgcttc
cagaggttgggaattcaccctccaaaaggtgtacttctgtatggaccacctggaactggg
aagacactcgttgcccatgcatttgcttcccagacaaatgcaacatttcttaagctaact
ggtccacaacttgccgtgaagcttattggtgagggagcaagacttgttcgtgatgccttt
cagcttgctaaagagaaagccccatgcattattttcattgatgaaattgatgcaattgga
agcaagcactttgatagtggtgatagggaagtgcaacaaacaattgtggagcttcttaat
cagttggatggcgtcgggagctatgagagtataaaggtaatagctgcaactaatcggcca
gaagttcttgatcctgcttttctgcgatctggccgtttagatcaaaagattgaattccct
catccatctgaacaggctagagttagaattctggagatccactcccgaaaaatggacaaa
aaccctgatgtaaactttgaagagttggcttgctgtacagatgattttaatggtgcacag
ctaaaggctgtatgctttgaggctagcatgctggcatttcaccgagatgctacagaggtt
cggcatgaggactttgtcagagcaattgcgcaagtaaaagacgggaattactga
DBGET
integrated database retrieval system
