Oryza sativa japonica (Japanese rice) (RAPDB): Os06g0526100
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Entry
Os06g0526100 CDS
T02163
Name
(GenBank) Basic helix-loop-helix dimerisation region bHLH domain containing protein
KO
K20558
transcription factor SPEECHLESS
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
Os06g0526100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os06g0526100
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
Os06g0526100
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-ProteinID:
BAH93555
RAP-DB:
Os06g0526100
UniProt:
Q653A4
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Position
6
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AA seq
396 aa
AA seq
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MGDALCDQLLLVDSDGGEFIPHHADADADDLFTILETWEGCANVVAGGAPATTTTLGSPI
AAAACISGVVGGQNHQQLPEPAAAKTVPATNNKRREEEVADRDGDGDDDDGSPQKRRKCC
SPESSTTDVAAATTPKTAHIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVD
YIKELQQVLHSLEAKKQRKVYTDQVLSPRPPATVAASCCSPRPPQLSPRLPPQLLKSTPP
LSPRLAVPISPRTPPTPGSPYRLLRLPPPPPPASGSNYASPAMTPTHHETAAPSLDAIAA
ELSAYASRQALGGGLLLPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAK
ISTVDDTAVNSFTVKIGIECELSAEELVQVIQQTFT
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgcgctgtgtgatcagctcctcttggtggacagcgacggcggcgagttcatc
ccccaccacgccgacgccgacgccgacgacctcttcaccatcctcgagacgtgggagggc
tgcgccaacgtcgtcgccggcggcgcccccgcgaccacgacgacgttaggtagtcctatt
gccgccgctgcctgcatctccggcgttgttggtgggcagaatcatcagcagctgccggaa
cctgccgccgcgaagaccgtgccagccaccaataacaagcggcgggaggaggaggtggcg
gaccgtgacggcgacggagacgacgacgacggttcgccgcagaagaggcgcaagtgctgc
tcgccggagtcttcgacgacggacgtggcggcggcgacgacgcccaagacggcgcacatc
gccgtggagcgcaaccggaggaagcagatgaacgagaacctcgccgtgcttcgctccctc
atgccatgcttctacgtcaagcggggagaccaggcatccatcataggaggagtggtggac
tacatcaaggagctgcagcaagtattgcactcgctggaggccaagaagcagcgcaaggtc
tacaccgaccaggtgctcagcccacggccgccggcgacggtggcggcgtcgtgctgcagc
ccgcgcccaccgcagctcagccccaggctgccgccgcagctgctcaagtccacgccgccg
ctcagcccgcggctcgccgtgccgatcagccccaggacgccgccgacgcccggtagtccc
tacaggctcctccggctgccgccgccgccgcccccggcgtccggctccaactacgcgtcc
ccggcgatgacgccgacccaccacgagacggcggcgccgtcgctggacgccatcgccgcc
gagctgtcggcgtacgccagcaggcaggcgctgggcggcggcctcctcctccccgacgtg
aaggtggagttcgccggcgcgaacctggtgctgaagacggtgtcgcagcggtcgccgggg
caggcggtgaagatcatcgccgccctggagggccgatcgctggagattcttcacgccaag
atcagcaccgtcgatgacaccgccgtcaactccttcactgtcaagattggaattgagtgc
gagctcagcgctgaagagttggtacaggtgattcagcaaacgttcacatga
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