Oryza sativa japonica (Japanese rice) (RAPDB): Os08t0282400-01
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Entry
Os08t0282400-01 CDS
T02163
Symbol
Os08g0282400
Name
(RAP-DB) Similar to Alpha-SNAP (Fragment).
KO
K15296
alpha-soluble NSF attachment protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os08t0282400-01 (Os08g0282400)
Membrane trafficking [BR:
dosa04131
]
SNARE
SNARE associated proteins
Others
Os08t0282400-01 (Os08g0282400)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNAP
TPR_12
TPR_2
TPR_MalT
DHR-2_Lobe_A
TPR_8
TPR_1
FlxA
Motif
Other DBs
RAP-DB:
Os08t0282400-01
LinkDB
All DBs
Position
chr08:join(11102862..11103006,11103885..11103934,11104024..11104096,11105464..11105543,11105696..11105847,11106995..11107154,11107228..11107275,11107460..11107540,11107859..11107939)
AA seq
289 aa
AA seq
DB search
MGDHEARGDDFEKKAEKKLSGWGIFGSKYEDAADLFDKGANSFKLAKNWSRAAQVYIKIA
NCHLKGDSKHEAASAYVEAANCYKKFSPQEAAQALNQAVDLFLEIGRLNMAARYCKDIGE
IYHQEQDLEKASDYLEKSADLFDSEGQSSQSNSIKQKVAEIAAQLEQYQKANEIFEAIAR
QQINNNLLKYSVRGILLNAGICQLCRGDVVAITNSMERYQDIDPTFSGTREYKLLSDLAA
AMEEGDVAKFTDAIKEFDSMTRLDPWKTTLLLRAKNELKKKEDDEDDLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccacgaggcccgcggggatgacttcgagaagaaggcggagaagaagctctcc
gggtgggggatcttcggctccaagtacgaggacgccgccgacctcttcgacaagggggcc
aactccttcaagctcgccaagaactggagcagagctgcacaagtgtacatcaagattgct
aactgccatttgaagggtgacagtaagcatgaagctgcctcagcttatgtcgaggcggca
aattgctataaaaagttctctcctcaagaggctgcacaagcgctaaaccaggctgttgat
cttttcttggaaattggtagattgaacatggctgcaagatattgtaaggacattggtgag
atatatcatcaagaacaagatttagagaaggcttcagattacctggaaaaatcggctgat
ctttttgacagtgaggggcaatcatctcaatcaaacagtatcaagcagaaagttgcagaa
attgctgctcagttggaacaataccagaaggcaaatgagatatttgaagcaattgctcgc
caacaaatcaacaataatcttcttaagtacagtgtcagaggtattctcctcaacgcaggc
atttgtcagctatgcagaggtgatgttgttgctatcacaaattcaatggagcgatatcag
gatattgacccaacattctcggggacacgagaatacaagcttttatctgatcttgctgca
gctatggaggaaggagatgttgccaagttcactgatgccattaaggaatttgacagcatg
acacgtctggacccctggaaaacaaccctcctcctcagggcaaagaatgagctgaagaaa
aaggaggatgacgaggatgatctaacctaa
DBGET
integrated database retrieval system
