Desulfosarcina ovata subsp. sediminis: DSCO28_35670
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Entry
DSCO28_35670 CDS
T06286
Name
(GenBank) hypothetical protein
KO
K17234
arabinooligosaccharide transport system substrate-binding protein
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DSCO28_35670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_35670
Transporters [BR:
dov02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinooligosaccharide transporter
DSCO28_35670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
BBO83001
UniProt:
A0A5K7ZS16
LinkDB
All DBs
Position
complement(4083102..4084481)
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AA seq
459 aa
AA seq
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MFRRWLDDLPLGLAPLLIATMGLVAGLYLLLHPVQRGEADLSMWVFGPLHADAYKMAAED
FSVRTDHTIDVQLINYNAVNQKLRSALWAAVNIPDLVEIEKSAAGGFFRGPLAKVGFLDL
KPYLVRDHILDRVPANSLATYTERGAIFGLPHDIHPVMLAYRADIVDPYLARRGLRMEDL
ATWGDYFRELRGLCTAGQRYLLQIEHGDAWAFQIFLMQRGGGIFGPGGRLRMDDDTAVQT
MTWMIPLVAESGDNQVAESLGNWDPSFYRGLIEGFYIAVLCPDWRTSQLEAFAGDLHGKM
RLVPLPAPMPGGLRTSQMGGTMLGIARSARDPELAWQFARQIYYGSPQQHGQLFRTTNII
TPDRRAWSDPAYHEPRPYWSNQVLGEQFIALADAVPPFYSSGFLPTAQAKLNEAIVACYG
RYRSHGVEGFEAYVRQRLTSAADYVRRQMAREPDWDAKE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgtttcgtcgctggctcgatgacctgcccctgggactcgcgcccctgctgattgcaacc
atggggctggtggcgggtctctatctgctgctccacccggtacaacgcggggaggccgac
ctgtccatgtgggtcttcggccccctgcatgccgacgcctacaagatggcggccgaggat
ttctcggtcaggaccgatcatacgatcgacgtgcagctgatcaactacaatgcggtcaat
cagaagctgcgctcggcgctctgggcggcggtgaacatccccgatctggtggagatcgaa
aagagcgcggccggggggtttttccgcggaccgctcgccaaggtcggttttctcgacctg
aaaccctacctggtgcgcgatcacatcctcgaccgggttccggccaatagcctggccacc
tataccgagcgcggggccattttcggactgccccacgatattcacccggtcatgctggcc
taccgtgccgacattgtcgacccctacctggcccggcgcggattgcgcatggaagatttg
gccacctggggcgattactttcgcgaactgcgcgggttgtgcactgccggccagcgttac
ctgctgcagatcgagcatggcgatgcctgggcgttccagattttcctgatgcaacgcggc
ggcgggattttcggccccggtggccggctgcgcatggatgacgacaccgcggtgcagacc
atgacctggatgattcccctggtcgccgaatccggtgacaaccaggtggccgaatccctg
ggcaactgggatccgtcgttttatcgcggcctcatcgaaggcttttacattgccgtgctc
tgccctgactggcgcacctctcagctggaggcctttgccggggacctgcatggcaaaatg
cgcctggtgcccctgccggcaccaatgcccggcggcctgcgcaccagccagatgggcgga
accatgctgggcattgcccgatcggccagggaccccgaactggcctggcagtttgcccgg
cagatctattacggctcgccgcagcagcatgggcagcttttccggaccaccaacatcatc
accccggaccgccgggcctggagcgatccggcctatcacgaaccacggccctactggtct
aatcaggtgctgggcgagcagttcatcgccctggccgacgcggtgccgccgttctactcc
agcggattcctgccgaccgcccaggcaaagctcaacgaggcgatcgtggcctgttacggt
cgttatcgctcccatggggtggaaggtttcgaagcttacgtccgccagcggctgacatcg
gccgccgattatgtgcgtcgccagatggcccgcgagcccgactgggacgccaaggagtaa
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