Desulfosarcina ovata subsp. sediminis: DSCO28_69540
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Entry
DSCO28_69540 CDS
T06286
Name
(GenBank) lipid A ABC transporter permease/ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DSCO28_69540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dov02000
]
DSCO28_69540
Transporters [BR:
dov02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DSCO28_69540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
SRP54
AAA_22
DUF87
AAA_29
FtsK_SpoIIIE
NACHT
RsgA_GTPase
MMR_HSR1
DEAD
AAA_23
AAA_28
AAA_7
nSTAND1
AAA_21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BBO86388
UniProt:
A0A5K8A1X6
LinkDB
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Position
complement(7969149..7971116)
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AA seq
655 aa
AA seq
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MRFDYGYDEEQRLGKPYDLKLLRRILPYARPHRTRLLLSVLLVITITLLELSVPYITKEI
IDRHIVPKARIAGDPQGTDSDGRQRLWVDLSDPVAAAVVARNGQRFEIRGTRAGIDMDAL
GRLETSDLEKLRHTDLSGIARITAIFMAVVVAIFACTFVQNLIMEIAGNRIMHDLRVNLY
RHIQAMPLSFFTSNPVARLVTRVTNDIANMHDLFTNFISMVFKDIFLLVGIAVVLLAMDW
RLALLTFLVLPLVALAAFGFSKRVRDVFRELRTKVAEINTRFSETISGIKVIQTFGHEED
NAGAFARLNHDNYLAGMRQINIFAVFMPVIEMLGVTAIAIVVHVGGSHVIGQTMSIGILA
AFLAYMRMFFRPIRDLAEKYNILQNAMASAERIFLLMDRPTAVTPGNERQTIDGPLKTIR
FEDVSLAYNPGEMVLKSINLSIEAGQTVAIVGATGSGKTSLVNLLVRFYDPTHGRVCFNG
IDCNRIAPAELRKRIALVMQDPFLFTGSLRDNLFFAAKAISAGRQAEILEASRCSQLVSR
FPDGLDTPITEGGASLSSGERQLISVARAFSTDPEAIILDEATSYVDSQTEMVLQEAIGN
LMHGRTCVVVAHRLTTARTADQIVVLNNGSIMEIGNHETLIAKKGYYYRLYQLHG
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgattacggctacgatgaagaacagcggctgggcaaaccctacgacctgaaa
ctgctgcgccgcattctgccctatgcccgcccccaccggacccgactgctcctctccgta
ctgctggtaatcaccatcacgctgctggaactgtcggtcccctacatcaccaaggagatc
attgatcggcatatcgttcccaaggcccgcatcgccggcgacccgcaaggaacggacagc
gacggtcggcaacggctgtgggtggacctgagcgatcccgtggccgccgccgtggtcgcg
cgcaacgggcaacgctttgaaatccgtggcacgcgcgccggcatcgacatggacgccctg
ggacgtctggagacgtccgatctggagaaattgcgccacaccgatctgtccggcatcgcc
cgcatcaccgccattttcatggccgtggtggtggccatcttcgcctgcacgtttgtgcag
aacctgatcatggaaattgccggcaaccgcatcatgcacgacctgcgggtcaacctgtac
cgccacatccaggccatgccgctctcttttttcacaagcaaccccgtggcccgtctggtc
acccgcgtgaccaacgacatcgccaacatgcacgacctgttcaccaatttcatttccatg
gtcttcaaagacatcttcctgctggtgggcattgccgtggtgctgctggccatggactgg
cggctggccctgctgacgtttctggtactgccgctggtggcgctggccgcattcggattc
tccaagcgcgtgcgcgacgtttttcgcgaactgcgcaccaaagtggccgaaatcaacacc
cgtttttcggaaaccatcagcggcatcaaggtcattcagacgttcggacacgaggaggac
aacgcaggcgccttcgcccgcctcaatcacgacaattacctggccggcatgcgccagatc
aacatcttcgcggttttcatgcccgtcatcgaaatgctcggggtcaccgccattgccatt
gtcgtgcatgtgggcggcagccatgtgatcggccagaccatgagtatcggtatcctggcc
gcatttctcgcctacatgcgcatgttcttccgccccatccgcgacctggcggaaaagtac
aacatcctgcaaaatgccatggcatcggccgagcggatcttcctgctcatggatcggccg
acggcggtcacaccgggaaacgagcggcagacaattgacggcccgctcaaaaccatccgc
ttcgaggatgtctccctggcctacaatcctggggagatggtgctcaaatcaatcaacctg
agtatcgaggccggacagaccgtggccatcgtcggggccaccggatcgggaaaaacctcg
ctggtcaatctgctggtgcggttttacgaccccacccatggccgggtgtgtttcaacggc
atcgactgcaaccggattgcgcccgccgagttgagaaaacggatcgccctggtcatgcag
gatccgtttctgttcaccggttcactgcgggacaatctctttttcgccgccaaagcaatc
tccgccggtcgccaggcggagattctcgaggcgtcccgctgcagccagctggtttcccgc
ttccccgacggtctcgacacccccatcaccgagggaggggcatccctctccagcggcgag
cgccagctgatctccgtggcacgggccttttccacggacccggaggcgatcatcctggat
gaggccacctcgtatgtggattcccagaccgaaatggttctgcaggaagccatcggcaac
ctgatgcacggacggacctgcgtggtcgtggcccaccgtctgaccacggcccgcaccgcc
gatcagattgtggtgctgaacaacgggtcgatcatggaaatcggcaaccacgaaaccttg
atagccaaaaaggggtattattaccggctttaccagctgcatggatag
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